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protein-protein docking

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protein-protein docking

I'm doing protein-protein docking, in which the C-terminus of one of my protein chains (PDB: 2ew4) was amidated, and when I submitted it to Rosetta and ran docking_protocol.static.linuxgccrelease, I found that the amide was automatically disassembled, how can I make it so that it doesn't happen?

2ew4_ 1.pdb is the structure before docking, 2ew4_ 2.pdb is the structure after docking

2ew4_1.pdb15 KB
2ew4_2.pdb14.69 KB
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Thu, 2023-11-02 18:23