I am trying to perform ab-initio peptide (6-15 in length) - protein docking as described at:
Confused by a number of issues and would be grateful for any guidance please if anyone has performed
Fragment generation - The Robetta server requires a minimum aa length of 26.
So how does one generate 3,5 and 9 length fragments for sub-26 length peptides ?
is it only possible as described in: