Unsolved

Hey, I was testing the enzyme design application with the files (1a91_CHGW_d1_mod.pdb, D2N_aX.params, D2N_ax_confs.pdb, Est_CHba_d2n.cst and flags) provided in one of the test folders.

Here is my command line:
/usr/local/rosetta3.2/rosetta_source/bin/enzyme_design.linuxgccrelease -database /usr/local/rosetta3.2/rosetta_database/ -overwrite @flags > enzyme_design.log

The run stopped a few seconds after it started. Here is the short log file:

core.init: Mini-Rosetta version exported from unknown

Friends,
I have installed rosetta 3.2.1. I want to predict the structure of a loop. The two terminal residues of the loop are cysteins. So i would like to tell the AbinitioRelax.linuxgccrelease script to consider the disulfide bond between the residues during structure prediction. Is there any option that i use with the AbinitionRelax script do achieve this ?

Thanks

I installed both:
PyRosetta-Release1.1-r34968.linux.64Bit.tar.bz2
PyRosetta.ScientificLinux-r40608.linux.64Bit.tar.bz2

PyRosetta-Release1.1-r34968:

[tru@mestizo ~]$ iPyRosetta
/c5/shared/pyrosetta/PyRosetta-Release1.1-r34968.linux.64Bit/IPython/Magic.py:38: DeprecationWarning: the sets module is deprecated
from sets import Set
Python 2.6.6 (r266:84292, Apr 6 2011, 19:50:10)
Type "copyright", "credits" or "license" for more information.

IPython 0.9.1 -- An enhanced Interactive Python.
? -> Introduction and overview of IPython's features.

Good morning,

I'm quite new to Rosetta software and I'm developing an application that uses Rosetta features. My application works fine but I'm quite annoyed with the output of Rosetta. Is there a way to set verbosity level in the shell to 0? I guess this feature exists but I've been unable to make it work so far. I tried

core::options::option.add_relevant(core::options::OptionKeys::run::silent);

but this doesn't seem to have effect.

Can anyone point me to the right direction?

Thanks a lot
Alejandro