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HbondMetric[[include:simple_metric_HbondMetric_type]]Hbonds
[[include:simple_metric_HbondMetric_type]]HbondsToAtomFilter
[[include:simple_metric_HbondMetric_type]]HbondsToResidueFilter
[[include:simple_metric_HbondMetric_type]]Hbs design
[[include:simple_metric_HbondMetric_type]]HDXEnergy
[[include:simple_metric_HbondMetric_type]]HeavyAtomFilter
[[include:simple_metric_HbondMetric_type]]Helical bundle predict
[[include:simple_metric_HbondMetric_type]]HelixHelixAngleFilter
[[include:simple_metric_HbondMetric_type]]HelixKinkFilter
[[include:simple_metric_HbondMetric_type]]HelixPairingFilter
[[include:simple_metric_HbondMetric_type]]HighestEnergyRegionOperation
[[include:simple_metric_HbondMetric_type]]HighResDockerMover
[[include:simple_metric_HbondMetric_type]]HighResEnsembleMover
[[include:simple_metric_HbondMetric_type]] [[HighResMover]]History of Rosetta documentation
[[include:simple_metric_HbondMetric_type]]HolesFilter
[[include:simple_metric_HbondMetric_type]]Home
[[include:simple_metric_HbondMetric_type]]Hotspot hash
[[include:simple_metric_HbondMetric_type]]HotspotDisjointedFoldTreeMover
[[include:simple_metric_HbondMetric_type]]How to turn on residue types that are off by default
[[include:simple_metric_HbondMetric_type]] [[carbohydrates|Carbohydrates]]How to use pointers correctly
[[include:simple_metric_HbondMetric_type]]How to write documentation
[[include:simple_metric_HbondMetric_type]] [[ link to | MyNewPage ]] [[Gollum]]HowToMakeClusterMetrics
[[include:simple_metric_HbondMetric_type]]Hshash utils
[[include:simple_metric_HbondMetric_type]]HSSTripletFilter
[[include:simple_metric_HbondMetric_type]]HybridizeMover
[[include:simple_metric_HbondMetric_type]]HydrogenBondConstraintGenerator
[[include:simple_metric_HbondMetric_type]]I want to do x
[[include:simple_metric_HbondMetric_type]]IdealizeMover
[[include:simple_metric_HbondMetric_type]]IfMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]IfThenFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]Ignore Unrecognized
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]ImportUnboundRotamersOperation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]IncludeCurrentOperation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]Incorporating Experimental Data
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[loops from density|loops-from-density]]Infrequently Asked Questions
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]InitializeByBinsMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]InitializeExtraRotsFromCommandlineOperation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]InitializeFromCommandlineOperation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]Input options
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]InsertPoseIntoPoseMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]Integration tests
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[pull request]]InteractingRotamerExplosionOperation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]]InteractionEnergyMetric
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]]InteractionGraphSummaryMetric
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]]Interface analyzer
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]]Interface_builder_InterfaceBuilder_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]]Interface_energy
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]]InterfaceAnalyzerMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]]InterfaceBindingEnergyDensityFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]]InterfaceHolesFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]]InterfaceHydrophobicResidueContacts
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]]InterfacePackingFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]]InterfaceRecapitulationMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[DesignRepackMover]]InterfaceScoreCalculatorMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]]Internal coordinates
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[Cartesian minimization]]Internal Documentation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[Cmake Overview and Specifics]] [[Building Rosetta on the Argonne "Mira" Blue Gene supercomputer]] [[ Methods | RosettaMP-Internal-Methods ]] [[ Database Organization | RosettaMP-Internal-Chemical-DB ]] [[ Membrane Representation | RosettaMP-Internal-Chemical-Rep ]] [[ Movers for Benchmarking | RosettaMP-Internal-Chemical-Movers ]] [[ Pilot Apps | RosettaMP-Internal-Chemical-Apps ]] [[Workflow]] [[Samplers|stepwise-samplers]] [[Screeners|stepwise-screeners]] [[Sidechain Design aided by Sewing]] [[SEWING Dictionary]]IRmsdFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]]IsoelectricPointMetric
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]IteratedConvergenceMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]IterativeHybridize
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]Jargon
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]Jd2
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]Jd3_derived_jq_FAQ
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]Jd3_derived_jq_home
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]Job_genealogist
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]JointSequenceOperation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]Js_And_type
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[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]Js_Not_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]Js_Or_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]JumpSelectors
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]]KeepRegionMover
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[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]]KIC_with_fragments
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]]KicMover
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[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]]LabelPoseFromResidueSelectorMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]]Larval_jobs
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]]LayerDesignOperation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]]Lazaridis Karplus Solvation Energy fa solv
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]]Legacy Scientific Benchmarks
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]]Legacy SEWING Dictionary
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]]LegacyAppendAssemblyMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[LegacyMonteCarloAssemblyMover]] [[Sewing Hasher Application] Application to generate legacy SEWING model and score files * [[Assembly of models]]LegacyAssemblyConstraintsMover
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[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]]Ligand dock
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]]Ligand_area_builder_LigandArea_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]]LigandBindingAssemblyMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[zinc_statistic_generator]]LigInterfaceEnergyFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]]LimitAromaChi2Operation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]]LinkResidues
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]]Lipsfile
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]]LoadedProbabilitiesMetric
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoadPDBMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LongestContinuousApolarSegmentFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LongestContinuousPolarSegmentFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Loop closing
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Loop_definer_Loops_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Loop_definer_LoopsDatabase_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Loop_definer_LoopsFile_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopAnalyzerFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopAnalyzerMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopBuilderMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopCreationMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopFinderMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopLengthChangeMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Loopmodel
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Loopmodel algorithms
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Loopmodel ccd
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Loopmodel kinematic
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopModelerMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopMoverFromCommandLineMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopOverMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopProtocolMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]LoopRemodelMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Loops file
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Make exemplar
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Make rot lib
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Make symmdef file
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]Make symmdef file denovo
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]]MakeBundleMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]]MakePolyXMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]]MapHotspotMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]Match
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]Match cstfile format
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]Maturing_larval_jobs
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MembAccesResidueLipophilicityFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]Membrane abinitio
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MembraneSpanConstraint
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MembraneSpanTermZConstraint
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MembraneTopologyMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MergePDBMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MetaFeaturesReporters
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MetalContactsConstraintGenerator
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[AddConstraints]] [[RemoveConstraints]]Metalloprotein abrelax
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]Metals
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MetricRecorderMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MetropolisHastings Documentation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[TrialCounterObserver]]MetropolisHastingsMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]Mg modeler
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[extract_pdbs]]Mhc energy tools
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MHCEpitopeEnergy
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]]MIFSTProbabilitiesMetric
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]]Minimization overview
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]]MinimizationRefinerMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]]Minirosetta
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]]Minirosetta comparative modeling
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]]MinMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]MinPackMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Missing_links_1
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Missing_links_2
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Missing_links_3
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Missing_links_4
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Missing_links_5
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Missing_links_6
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Missing_links_7
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Mm_factory_MoveMapFactory_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Model comparison with geometric hashing
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Model Generation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]ModelTrimmer
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]ModifyAnnealerOperation
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]ModifyVariantTypeMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Monte_carlo_loader_MONTECARLOS_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]MonteCarloRecoverMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]MonteCarloTestMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]MonteCarloUtilMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Motif Dock Score
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]MotifGraftMover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]Move_map_builder_MoveMapBuilder_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]]MoveBeforeFilter
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Movemap file
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]MoveMapFactories RosettaScripts
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]] [[Pose]] [[SequenceMover]]Mover template
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover test
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AbscriptLoopCloserCM_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AbscriptMover_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AcceptToBestMover_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddChain_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddChainBreak_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddCompositionConstraintMover_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddConstraints_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddConstraintsToCurrentConformationMover_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddEncounterConstraintMover_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddFlankingVirtualResiduesMover_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddHelixSequenceConstraints_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddHydrogens_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddJobPairData_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddMembraneMover_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddMembraneSpanConstraint_type
[[include:simple_metric_HbondMetric_type]] [[include:mover_If_type]] [[include:simple_metric_InteractionEnergyMetric_type]] [[include:simple_metric_InteractionGraphSummaryMetric_type]] [[include:mover_InterfaceAnalyzerMover_type]] [[include:mover_InterfaceScoreCalculator_type]] [[include:simple_metric_IsoelectricPointMetric_complex_type]] [[include:mover_KeepRegionMover_type]] [[include:mover_KinaseMover_type]] [[include:mover_LabelPoseFromResidueSelectorMover_type]] [[include:mover_LigandBindingAssemblyMover_type]] [[include:to_LimitAromaChi2_type]] [[include:simple_metric_LoadedProbabilitiesMetric_type]] [[include:mover_MakeBundle_type]] [[include:mover_MakePolyX_type]] [[include:../../xsd/mover_MapHotspot_type]] [[include:simple_metric_MIFSTProbabilitiesMetric_type]] [[include:mover_MinMover_type]] [[include:filter_MoveBeforeFilter_type]]Mover_AddMembraneSpanTermZConstraint_type
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