You are here
Rosetta 3 - Applications
Log in to post new content in the forum.
| Topic / Topic starter | Replies | Views |
Last post |
|
|---|---|---|---|---|
|
comparative modelling and broker by felipet » Tue, 2013-02-05 08:33 |
4 |
4,384 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
[TopologyBroker Exception]: BBTorsion at pos 468unitialized...unclaimed by tevang » Wed, 2013-04-10 15:07 |
5 |
4,939 |
by rmoretti Mon, 2014-04-21 06:47 |
|
|
Running RosettaHoles2 by weehee » Wed, 2013-02-13 09:35 |
3 |
3,805 |
by weehee Mon, 2014-04-21 06:47 |
|
|
membrane scoring function performance by tevang » Wed, 2013-03-20 08:40 |
15 |
15,327 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
symmetric fixbb design with design_hpatch by sdh_h » Sat, 2013-02-02 01:48 |
2 |
2,959 |
by ronj Mon, 2014-04-21 06:47 |
|
|
Results of enzyme_design not consistent with Resfile by yogeshkd » Thu, 2013-02-14 15:56 |
6 |
6,651 |
by yogeshkd Mon, 2014-04-21 06:47 |
|
|
dihedral_between_bonded_children: atoms are not both my children! by pdbb » Fri, 2013-04-05 06:40 |
3 |
3,395 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
ligand conformer generation for enzyme design by bo » Mon, 2013-02-11 16:51 |
1 |
2,502 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Reproducing the exact result using information from previos run by nawsad » Thu, 2013-03-14 12:05 |
2 |
2,681 |
by nawsad Mon, 2014-04-21 06:47 |
|
|
Docking with constraints by ytao » Tue, 2013-04-02 09:45 |
6 |
8,080 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Multiple ligands in enzyme design application by yogeshkd » Mon, 2013-02-11 10:13 |
4 |
5,397 |
by yogeshkd Mon, 2014-04-21 06:47 |
|
|
loop re-modeling std::out_of_range by rlwoltz » Tue, 2013-03-12 18:11 |
9 |
9,036 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Fold tree C->N: RosettaScripts by aroop » Wed, 2013-02-13 10:31 |
8 |
8,250 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Error when running Remodel with EnzDes constraint file by aloshbau » Wed, 2013-04-17 22:23 |
2 |
4,061 |
by aloshbau Mon, 2014-04-21 06:47 |
|
|
ligand_docking_analysis by Prasanth Kumar » Thu, 2013-05-09 23:51 |
4 |
5,141 |
by rmoretti Mon, 2014-04-21 06:47 |
|
|
No interface for protein - Interface Analyzer by aloshbau » Tue, 2013-05-21 21:00 |
1 |
2,874 |
by jarod Mon, 2014-04-21 06:47 |
|
|
score and relax by Prasanth Kumar » Thu, 2013-05-02 05:09 |
1 |
3,331 |
by jadolfbr Mon, 2014-04-21 06:47 |
|
|
modeling 4 linkers between 2 domains by pdbb » Thu, 2013-05-16 08:23 |
1 |
2,502 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Problems with always_constrained_relax_script by wsgosal » Wed, 2013-05-29 04:39 |
3 |
4,821 |
by rmoretti Mon, 2014-04-21 06:47 |
|
|
contents of span file by tevang » Mon, 2013-04-15 05:01 |
1 |
2,572 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Relax with protein+complex by Prasanth Kumar » Wed, 2013-05-08 23:16 |
4 |
5,854 |
by Prasanth Kumar Mon, 2014-04-21 06:47 |
|
|
Error when running cluster by aloshbau » Wed, 2013-05-01 20:45 |
3 |
4,746 |
by rmoretti Mon, 2014-04-21 06:47 |
|
|
deltaG calculations by Prasanth Kumar » Wed, 2013-05-15 07:06 |
3 |
6,493 |
by rmoretti Mon, 2014-04-21 06:47 |
|
|
ddG filter gives deltaG calculation number? by jarod » Tue, 2013-05-28 23:43 |
2 |
3,993 |
by jarod Mon, 2014-04-21 06:47 |
|
|
number of structures in homology modeling for cluster analysis by pdbb » Fri, 2013-04-12 08:52 |
1 |
2,685 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
docking with constraints by talavera » Tue, 2013-05-07 01:50 |
1 |
4,095 |
by rmoretti Mon, 2014-04-21 06:47 |
|
|
mover "RepackMinimize" does not support chains > 2? by jarod » Mon, 2013-05-20 02:17 |
6 |
7,604 |
by jarod Mon, 2014-04-21 06:47 |
|
|
Problems when running Rosetta VIP with cofactors by Basantab » Fri, 2013-04-26 13:31 |
14 |
15,207 |
by Basantab Mon, 2014-04-21 06:47 |
|
|
Modeling flexible linkers with Floppytail by pdbb » Sun, 2013-05-12 15:55 |
2 |
3,323 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
Pepspec Errors running 3.4 by rrphenix » Tue, 2013-05-28 12:08 |
4 |
4,467 |
by rmoretti Mon, 2014-04-21 06:47 |
|
|
make_rot_lib issue by jarek » Thu, 2013-04-11 08:21 |
4 |
5,017 |
by smlewis Mon, 2014-04-21 06:47 |
|
|
in silico affinity maturation design by jarod » Mon, 2013-05-20 02:07 |
11 |
12,656 |
by jarod Mon, 2014-04-21 06:47 |
|
|
PDB format for RosettaDNA by brspurri » Thu, 2013-05-30 11:21 |
5 |
6,534 |
by brspurri Mon, 2014-04-21 06:47 |
|
|
Add missing residues in loop modeling by exchhattu » Thu, 2013-06-20 17:38 |
1 |
3,690 |
by smlewis Mon, 2014-04-21 06:48 |
|
|
Discrepancy between the total pose energy and sum of per residue energies by vijayan » Tue, 2013-07-02 07:24 |
3 |
4,570 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
strange effect in: SymDock.linuxgccrelease by ast » Tue, 2013-06-11 11:05 |
3 |
3,902 |
by ast Mon, 2014-04-21 06:48 |
|
|
trouble in floppytail modelling by ytao » Thu, 2013-06-27 13:15 |
1 |
2,501 |
by ytao Mon, 2014-04-21 06:48 |
|
|
select_best_unique_ligand_poses output by ast » Thu, 2013-07-11 02:33 |
2 |
3,367 |
by ast Mon, 2014-04-21 06:48 |
|
|
interface_delta ligand_docking by Prasanth Kumar » Tue, 2013-06-18 08:37 |
1 |
2,708 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
membrane modeling error by benniu2004 » Mon, 2013-07-01 17:59 |
1 |
2,549 |
by smlewis Mon, 2014-04-21 06:48 |
|
|
Why is proline hydroxylated？ by kwonglynn » Tue, 2013-06-25 02:38 |
3 |
5,300 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
pdb2vall by JadAbbass » Mon, 2013-07-08 12:11 |
3 |
3,953 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
SymDock for docking only the ligand? by ast » Mon, 2013-06-17 09:53 |
4 |
5,504 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Protein-DNA Docking using RosettaScripts? by brspurri » Fri, 2013-06-07 09:06 |
1 |
4,543 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
printing our per-residue energies including H-bonding energies by vijayan » Tue, 2013-07-02 08:51 |
2 |
3,787 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
A question on the logic of enzyme design by agulsevin » Thu, 2013-06-13 08:10 |
2 |
4,100 |
by agulsevin Mon, 2014-04-21 06:48 |
|
|
CSrosetta run problem by erin_cutts » Fri, 2013-06-28 09:52 |
2 |
3,754 |
by erin_cutts Mon, 2014-04-21 06:48 |
|
|
Loop prediction by yzhou » Thu, 2013-07-18 14:24 |
3 |
4,376 |
by jadolfbr Mon, 2014-04-21 06:48 |
|
|
Ligand creation by Prasanth Kumar » Fri, 2013-08-02 09:48 |
1 |
2,481 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Unsatisfied interface H-bond in Ligand docking by Prasanth Kumar » Thu, 2013-07-18 12:04 |
1 |
4,224 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Error while running RosettaLigand by Ryhon Wang » Tue, 2013-07-30 02:51 |
4 |
5,177 |
by Ryhon Wang Mon, 2014-04-21 06:48 |
|
|
A problem with RosettaLigand by Rosettasz » Fri, 2013-07-19 16:09 |
16 |
19,527 |
by Rosettasz Mon, 2014-04-21 06:48 |
|
|
high-res docking by tfliu » Mon, 2013-07-15 02:49 |
2 |
3,372 |
by tfliu Mon, 2014-04-21 06:48 |
|
|
Binding energy contribution broken down by residue by brspurri » Tue, 2013-07-23 12:47 |
1 |
2,874 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Alanine Scanning by gjbartlett » Mon, 2013-08-05 07:02 |
1 |
3,705 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
docking energies - deltadeltaG calculation by ast » Fri, 2013-07-19 07:30 |
5 |
9,912 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
creating a model using a base pdb and extending a chain by rlwoltz » Fri, 2013-07-12 15:35 |
1 |
2,734 |
by nawsad Mon, 2014-04-21 06:48 |
|
|
About loophash and batchrelax. by Run » Mon, 2013-07-22 23:54 |
14 |
13,479 |
by Run Mon, 2014-04-21 06:48 |
|
|
submit_NGK.py not creating output files by nkato2 » Wed, 2013-08-28 23:37 |
1 |
2,547 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
rosetta.script segmentation fault by felipet » Wed, 2013-10-02 10:41 |
4 |
6,131 |
by jadolfbr Mon, 2014-04-21 06:48 |
|
|
RosettaRemodel can not work now? by myputer » Tue, 2013-08-13 16:56 |
7 |
7,659 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
About scorefunction. by Run » Mon, 2013-09-09 23:08 |
7 |
7,733 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Comparative modeling by MRH » Mon, 2013-08-19 23:08 |
1 |
2,491 |
by smlewis Mon, 2014-04-21 06:48 |
|
|
Loop modelling before peptide docking by wsgosal » Tue, 2013-10-01 07:24 |
4 |
5,351 |
by wsgosal Mon, 2014-04-21 06:48 |
|
|
Error with FlexPepDock by aloshbau » Sat, 2013-08-10 11:51 |
1 |
2,734 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
homology membrane modeling demo in rosetta 3.5 by rlwoltz » Mon, 2013-09-09 10:26 |
1 |
2,917 |
by smlewis Mon, 2014-04-21 06:48 |
|
|
Full Protocol by shekhar » Fri, 2013-10-04 01:07 |
1 |
3,082 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
usage of score3 by Run » Sat, 2013-09-28 02:06 |
16 |
17,281 |
by jadolfbr Mon, 2014-04-21 06:48 |
|
|
comparative modeling of protein-ligand complex by tevang » Mon, 2013-09-09 09:06 |
3 |
4,429 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Ligand atom RMSD calculation by lkrathn » Wed, 2013-08-14 21:25 |
2 |
4,733 |
by lkrathn Mon, 2014-04-21 06:48 |
|
|
Problem with SymmDock in helical symmetry by mumdonar » Wed, 2013-09-18 03:59 |
2 |
3,893 |
by mumdonar Mon, 2014-04-21 06:48 |
|
|
Symmetry definition for coiled-coil dimer and trimer by kszczepaniak » Fri, 2013-10-11 05:33 |
2 |
5,786 |
by kszczepaniak Mon, 2014-04-21 06:48 |
|
|
Problem about energy score by tfliu » Tue, 2013-11-05 02:09 |
7 |
7,844 |
by Ora Schueler-Furman Mon, 2014-04-21 06:48 |
|
|
profit program in antibody design by tzhou » Tue, 2013-10-15 23:29 |
1 |
2,894 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Score - Strange message by Ashafix » Wed, 2013-11-20 15:23 |
2 |
3,587 |
by Ashafix Mon, 2014-04-21 06:48 |
|
|
restrain residues in docking by albumns » Sat, 2013-11-02 08:52 |
1 |
2,668 |
by jadolfbr Mon, 2014-04-21 06:48 |
|
|
MaxSub and MaxSub2.0 by JadAbbass » Tue, 2013-10-15 13:36 |
2 |
3,685 |
by JadAbbass Mon, 2014-04-21 06:48 |
|
|
Make Fragments by Run » Mon, 2013-11-11 05:31 |
1 |
2,715 |
by smlewis Mon, 2014-04-21 06:48 |
|
|
symmetrical membrane modeling by rlwoltz » Tue, 2013-10-29 03:41 |
5 |
6,148 |
by jadolfbr Mon, 2014-04-21 06:48 |
|
|
assymetric dymer modelling with comparative and ab initio by marcia » Mon, 2013-10-14 08:33 |
3 |
4,947 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Symmetric docking with multiple chains as asymmetric unit by sarah29 » Tue, 2013-11-05 20:24 |
1 |
3,253 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
the flexpepdock refinement and ab-initio by tfliu » Mon, 2013-12-23 19:17 |
6 |
6,530 |
by tfliu Mon, 2014-04-21 06:48 |
|
|
rosetta's keyword list by fred » Tue, 2014-01-21 06:03 |
1 |
2,769 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
protein-protein docking with flexible backbone by tim » Fri, 2013-12-20 05:52 |
1 |
4,417 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
FlexPepDock and total score problem by tkellici » Fri, 2014-01-17 06:07 |
2 |
3,313 |
by Ora Schueler-Furman Mon, 2014-04-21 06:48 |
|
|
Ab-initio modeling on part of the protein by xiayanlawrence » Thu, 2013-12-19 07:45 |
1 |
3,501 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
Cannot get a negative score after relax by kxiao » Tue, 2014-01-28 22:28 |
6 |
7,946 |
by rmoretti Mon, 2014-04-21 06:48 |
|
|
minirosetta: weird behavior by fred » Wed, 2014-01-22 05:57 |
4 |
5,194 |
by fred Mon, 2014-04-21 06:48 |
|
|
fixbb with symmetry error by Prasanth Kumar » Sun, 2014-01-26 10:56 |
4 |
5,561 |
by Prasanth Kumar Mon, 2014-04-21 06:48 |
|
|
do mpi apps share memory? by fred » Thu, 2014-01-23 11:49 |
2 |
3,412 |
by fred Mon, 2014-04-21 06:48 |
|
|
Abinito for Multimers by Prasanth Kumar » Wed, 2014-01-22 17:45 |
2 |
3,537 |
by Prasanth Kumar Mon, 2014-04-21 06:48 |
|
|
extract silent error - tag mismatch by shrutikhare » Thu, 2014-04-03 00:13 |
5 |
7,088 |
by rmoretti Mon, 2014-04-21 10:47 |
|
|
Scoring residue vs. organic ligand by almeida » Tue, 2014-04-08 12:18 |
12 |
13,929 |
by rmoretti Thu, 2014-04-24 14:43 |
|
|
ambiguous constraints by shrutikhare » Mon, 2014-05-12 04:42 |
1 |
3,448 |
by rmoretti Mon, 2014-05-12 08:25 |
|
|
Connecting linkers by Prasanth Kumar » Tue, 2014-05-06 00:53 |
1 |
3,233 |
by smlewis Mon, 2014-05-12 08:32 |
|
|
clustering in RosettaRemodel by cheyuk » Wed, 2014-04-23 03:09 |
3 |
4,103 |
by rmoretti Mon, 2014-05-12 08:45 |
|
|
How do I explicitly add residues for design in the interface optimization script? by ahonegger » Mon, 2014-05-12 07:40 |
2 |
3,524 |
by ahonegger Mon, 2014-05-12 09:08 |
|
|
Unable to set up interface foldtree because there are no movable jumps - (antibody/antigen docking) by snorp » Mon, 2014-04-14 13:01 |
2 |
3,902 |
by jadolfbr Mon, 2014-05-12 10:41 |
|
|
Ligand docking: ERROR: set_atom_base: atoms must be bonded! by mengzhang » Mon, 2014-05-12 12:36 |
1 |
2,669 |
by rmoretti Mon, 2014-05-12 15:08 |
|
|
High energies after loopmodel run by michki » Thu, 2014-05-08 05:14 |
3 |
4,014 |
by rmoretti Mon, 2014-05-12 15:16 |
Log in to post new content in the forum.
