why energy is positive?
Hello:
I am using kic loop protocol to refine a big loop with 12 aa with rosetta. I noticed that the energy is positive from generated .PDB file:
#END_POSE_ENERGIES_TABLE ./my_0002.pdb
chainbreak 0.00388937
loop_cenrms 0
loop_rms 0
total_energy 189.805
Shouldn't it be a negative value in principle?
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