Structure prediction

Hi all,

I’m trying to do a homology model using multiple templates taking as reference the RosettaCM tutorial (https://www.rosettacommons.org/demos/latest/tutorials/rosetta_cm/rosetta_cm_tutorial).

 I have some doubts regarding the use of some weights for each of the stages.

Hi,

I am working for one of the labs, I have been making changes to CSRosetta toolbox like making it compatible with latest versions of Rosetta and would like our lab dir be added into the commons repo. I did not know who to contact. I can give more details about the lab, changes and so on.

Thanks.

I want to include the GDP/GTP and magnesium ions in the threading process for a tubulin homology model I am trying to make (since I do believe this is the ideal way to start formulating the homology model). For some reason, however, only the GTP is included in the output pdb. I get an error message that says: 

Error: potential mismatch between sequence from alignment  and sequence from PDB!

Hi,

I am a new user of rosetta and tried to run tutorials with rna denovo structure prediction. However, when I ran the tutorial, the program said it could not find the rna folder and the information is kept in coarse_rna fold. So I have to create a rna fold that link to coarse_rna fold. However, in that folder, it doesn't have residue_types.txt which is hightlighted below. Could you help to solve my problem? Thank you very much.

My