Structure prediction

Hello,

I have a query protein with 300 amino acids and I want to predict its homology models based on the template (saying templateA.pdb) with exactly same 300 amino acids (for testing purpose).

By using Robetta Server, what I did was listed below:

I pasted the query target sequence, and I selected comparative modelling option and set 1000 models.

I then uploaded the template PDB structure (templateA.pdb).

Hi all,

I am working on the structural prediction of a symmetric multidomain protein using RosettaCM - I have to add a tetramerization domain for which no template structure is available, but for which I can set some distance constraints to steer the prediction in the right direction. For this, I changed

Dear all,
        I am trying to compile a c++ version of Rosetta into a python version in my ubuntu system(Ubuntu 5.4.0-6ubuntu1~16.04.12) recently, because I modified some c++ files in C++ Rosetta to add a fragment library which has fragments with a variable length (And it can compile successfully in c++ version of Rosetta).

Dear all,
        I am trying to compile a c++ version of Rosetta into a python version in my ubuntu system(Ubuntu 5.4.0-6ubuntu1~16.04.12) recently, because I modified some c++ files in C++ Rosetta to add a fragment library which has fragments with a variable length (And it can compile successfully in c++ version of Rosetta).