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ROSIE FAQ by Sergey » Mon, 2013-04-08 10:41 |
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30,320 |
by G-Jade Fri, 2020-12-18 22:40 |
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Running ROSIE from terminal by sc19 » Thu, 2022-07-14 01:09 |
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445 |
by sc19 Thu, 2022-07-14 01:09 |
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ROSETTA design affinity optimization by wentlewi » Mon, 2020-02-03 01:42 |
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1,561 |
by wentlewi Mon, 2020-02-03 01:42 |
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Ways to improve ROSIE docking2 jobs by AdoCbl » Wed, 2015-09-23 15:12 |
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1,765 |
by AdoCbl Wed, 2015-09-23 15:12 |
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Results are NOT emailed by alsayeghkn » Wed, 2022-03-23 08:55 |
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491 |
by alsayeghkn Wed, 2022-03-23 08:55 |
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Academic email verification by Yair Tenorio » Mon, 2023-10-23 12:18 |
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298 |
by Yair Tenorio Mon, 2023-10-23 12:18 |
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Cancel / delete Rosie not working by fglaser » Tue, 2015-07-07 01:14 |
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1,846 |
by fglaser Tue, 2015-07-07 01:14 |
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Transitioning from ROSIE to Rosetta by AdoCbl » Wed, 2015-09-23 11:49 |
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1,801 |
by AdoCbl Wed, 2015-09-23 11:49 |
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Symmetric Docking Protocol by Sergey » Tue, 2013-10-29 17:33 |
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5,551 |
by Sergey Mon, 2014-04-21 06:48 |
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ROSIE pKa calculation issue by lijum » Mon, 2020-06-15 12:12 |
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1,223 |
by lijum Mon, 2020-06-15 12:12 |
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antibody-antigen interface score by jessye » Sun, 2018-07-01 21:12 |
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1,548 |
by jessye Sun, 2018-07-01 21:12 |
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Multiple antibody jobs failed by larae » Mon, 2022-09-12 09:54 |
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421 |
by larae Mon, 2022-09-12 09:54 |
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Sequence Tolerance broken links? by dnamkr » Fri, 2021-10-22 11:34 |
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701 |
by dnamkr Fri, 2021-10-22 11:34 |
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Rosettadock Error by jinfeng » Fri, 2022-11-18 20:39 |
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692 |
by jinfeng Fri, 2022-11-18 20:39 |
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account does not have verified academic email address by haria256 » Sat, 2022-07-02 03:33 |
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496 |
by haria256 Sat, 2022-07-02 03:33 |
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Erraser single-residue protocol now open to public by Sergey » Thu, 2012-10-25 18:21 |
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2,184 |
by Sergey Mon, 2014-04-21 06:47 |
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farfar2 failed by Kamonwan » Mon, 2023-01-23 18:41 |
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390 |
by Kamonwan Mon, 2023-01-23 18:41 |
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Ways to improve both docking2 and symmetric_docking jobs by AdoCbl » Wed, 2015-09-23 14:43 |
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1,846 |
by AdoCbl Wed, 2015-09-23 15:35 |
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Ligand Docking Protocol now available for academic users by Sergey » Sat, 2014-05-10 14:39 |
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2,304 |
by Sergey Sat, 2014-05-10 14:39 |
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Antibody Job Failed by aquilesms89 » Thu, 2020-08-13 08:50 |
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1,406 |
by aquilesms89 Thu, 2020-08-13 08:50 |
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Correctly Formatting a PDB file for analysis of a Zinc Finger Motif by rslack » Thu, 2022-04-28 18:19 |
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517 |
by rslack Thu, 2022-04-28 18:38 |
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Relax application before ROSIE by mwinn99 » Wed, 2022-05-25 13:23 |
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522 |
by mwinn99 Wed, 2022-05-25 13:23 |
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my status jobs been queued in such longer time by Atirah » Fri, 2020-04-10 02:55 |
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1,501 |
by Atirah Fri, 2020-04-10 02:57 |
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problem in downloading result from backrub server by ladimafakher » Sun, 2018-07-01 00:50 |
0 |
1,323 |
by ladimafakher Sun, 2018-07-01 00:50 |
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Ligand Binding by KS Siddiqui » Thu, 2019-04-25 01:01 |
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1,315 |
by KS Siddiqui Thu, 2019-04-25 01:01 |
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Extracting starting coordinates from ligand docking output by rgb6@le.ac.uk » Wed, 2023-03-08 02:03 |
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478 |
by rgb6@le.ac.uk Wed, 2023-03-08 02:03 |
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Erraser protocol now open to public by Sergey » Wed, 2012-10-17 12:38 |
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2,220 |
by Sergey Mon, 2014-04-21 06:47 |
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pKa app is now public! by Sergey » Mon, 2014-03-10 15:47 |
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3,731 |
by Sergey Mon, 2014-03-10 15:47 |
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getting right protonation state from PKa of Rosie by hajar » Fri, 2020-07-24 16:24 |
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1,124 |
by hajar Fri, 2020-07-24 16:24 |
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ROSIE ANTIBODY GRAFTING by izzafajriani » Sat, 2023-02-25 01:28 |
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432 |
by izzafajriani Sat, 2023-02-25 01:28 |
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I have jobs queued for nearly 1 month by jessye » Thu, 2019-10-10 03:36 |
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1,370 |
by jessye Thu, 2019-10-10 03:36 |
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Problem with ROSIE antibody modeling by wildchipiron » Thu, 2016-04-14 20:00 |
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1,840 |
by wildchipiron Thu, 2016-04-14 20:00 |
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Verification by davelansing » Wed, 2023-07-05 12:09 |
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196 |
by davelansing Wed, 2023-07-05 12:10 |
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FARFAR2 - Extra Minimize Hangs on Submittal by jvogt » Thu, 2022-06-16 09:41 |
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512 |
by jvogt Thu, 2022-06-16 09:41 |
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Questions about SnugDock result analysis by LTJ » Thu, 2020-07-02 17:41 |
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1,276 |
by LTJ Thu, 2020-07-02 17:41 |
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Rosetta processes crashed by izzafajriani » Thu, 2023-02-23 15:35 |
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438 |
by izzafajriani Thu, 2023-02-23 15:35 |
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m6A modification on FARFAR2 by uke » Mon, 2023-09-18 04:31 |
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352 |
by uke Mon, 2023-09-18 04:31 |
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Rosetta-Vienna RNP-ddG failed by Athena Chu » Mon, 2022-04-18 18:21 |
0 |
512 |
by Athena Chu Mon, 2022-04-18 18:21 |
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SNUGDOCK by adva » Sun, 2017-07-16 00:46 |
1 |
2,130 |
by rmoretti Mon, 2017-07-17 07:57 |
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Academic domains list by aozalevsky » Tue, 2022-05-24 09:24 |
1 |
688 |
by rmoretti Wed, 2022-05-25 08:25 |
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Beta-Peptide Design Protocol now available for academic users by Sergey » Wed, 2012-11-28 12:32 |
1 |
7,488 |
by jaw315 Thu, 2022-06-09 10:26 |
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SnugDock: chain_id H represents more than one chain by tweetman » Wed, 2018-05-02 04:24 |
1 |
2,563 |
by sheehajh Wed, 2018-05-02 06:38 |
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Access to GitHub Denied by Lucia_G » Wed, 2023-01-25 07:13 |
1 |
461 |
by Sergey Mon, 2023-01-30 12:29 |
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Docking two proteins with interfacing ligand by luisalles » Tue, 2016-04-05 23:56 |
1 |
2,712 |
by rmoretti Fri, 2016-04-29 09:27 |
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academic email by rhn » Wed, 2022-08-17 12:44 |
1 |
592 |
by Sergey Thu, 2022-08-18 13:34 |
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Snugdock versus Docking with an ensemble of protein conformations by MIke Kent » Fri, 2019-03-29 10:07 |
1 |
1,941 |
by jeliazkov Fri, 2019-03-29 10:34 |
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farfar2 not submitting jobs by santos » Thu, 2023-03-02 05:07 |
1 |
531 |
by everyday847 Thu, 2023-03-02 07:51 |
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Academic verification by hkabj77 » Wed, 2023-06-28 00:35 |
1 |
259 |
by Sergey Thu, 2023-06-29 11:23 |
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Rosetta Antibody by Maryam_tabasinezhad » Sun, 2016-08-28 00:29 |
1 |
2,639 |
by smlewis Sun, 2016-08-28 12:04 |
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Academic adress by ErikRihtar » Sat, 2022-10-01 08:39 |
1 |
564 |
by Sergey Mon, 2022-10-03 13:49 |
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Rosie vip function fails on multiple tries by Amy F » Sat, 2019-06-15 12:51 |
1 |
1,786 |
by rmoretti Mon, 2019-06-24 12:20 |
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Error of non standard amino acid (SnugDock) by bt13d072 » Wed, 2017-03-01 19:51 |
1 |
2,709 |
by rmoretti Mon, 2017-03-06 09:14 |
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Academic Email Address by cecii_xy » Tue, 2022-11-08 07:31 |
1 |
649 |
by Sergey Tue, 2022-11-08 12:34 |
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Modeling Antibody Structure failed by Sunyp_IM » Sun, 2017-08-06 02:59 |
1 |
2,444 |
by rmoretti Mon, 2017-08-14 15:09 |
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Is there a limitation of RNA length using farfar2? by lwb » Wed, 2023-01-04 19:09 |
1 |
608 |
by everyday847 Wed, 2023-01-04 19:20 |
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Academic address not verified during rosie login by pomden31 » Thu, 2022-05-26 10:04 |
1 |
668 |
by Sergey Thu, 2022-05-26 10:21 |
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Academic email by Morteza Ghandadi » Sun, 2022-07-17 00:36 |
1 |
643 |
by rmoretti Mon, 2022-07-18 06:59 |
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Rosie login email verification by dominiksIZI » Tue, 2023-02-21 06:10 |
1 |
443 |
by Sergey Tue, 2023-02-21 09:44 |
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"in_progress" decoy files in some docking2 local_docking job tar archives by AdoCbl » Sun, 2015-10-18 13:47 |
1 |
2,787 |
by rmoretti Sun, 2015-10-18 13:59 |
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error in peptiderive job result by PRITAM » Wed, 2019-05-08 09:33 |
1 |
1,822 |
by rmoretti Mon, 2019-06-24 12:30 |
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antibody modeling fail by jessye » Tue, 2019-07-02 01:57 |
1 |
1,903 |
by rmoretti Wed, 2019-07-10 09:09 |
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ROSIE Queue not loading by ramon-arg » Mon, 2023-07-31 10:09 |
1 |
233 |
by Sergey Mon, 2023-07-31 11:45 |
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Academic address not verified during Rosie login by schacherl » Fri, 2022-10-07 02:06 |
1 |
670 |
by Sergey Fri, 2022-10-07 15:28 |
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Academic email verification by rpracella » Wed, 2023-10-25 23:39 |
1 |
130 |
by Sergey Thu, 2023-10-26 14:27 |
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academic institution domain is not listed by ruma99 » Tue, 2022-05-24 08:33 |
1 |
692 |
by Sergey Tue, 2022-05-24 10:45 |
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Academic verification by AnaFernandes-CTN » Tue, 2023-05-30 08:57 |
1 |
328 |
by Sergey Tue, 2023-05-30 11:32 |
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chothia numbering error of FR_L1 by Sbrendle » Mon, 2016-08-22 06:58 |
1 |
2,411 |
by nmarze Mon, 2016-08-22 11:57 |
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Support for local install of ROSIE? by jjv5 » Mon, 2022-03-21 08:58 |
1 |
743 |
by Sergey Mon, 2022-03-21 12:10 |
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Academic email verification by john2 » Tue, 2023-10-17 11:41 |
1 |
161 |
by Sergey Tue, 2023-10-17 13:13 |
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Docking results by sujigeorge1979 » Wed, 2019-06-12 23:40 |
1 |
1,876 |
by jeliazkov Mon, 2019-06-17 06:07 |
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RMSD - Score by LT » Thu, 2017-02-23 12:59 |
1 |
2,603 |
by rmoretti Thu, 2017-02-23 13:03 |
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Cannot confirm registration to the Rosie site by fglaser » Sun, 2013-10-13 02:52 |
1 |
9,662 |
by Sergey Mon, 2014-04-21 06:48 |
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RMSD values for symmetric_docking clockwise vs counterclockwise cyclical outputs by AdoCbl » Sun, 2015-10-18 12:49 |
1 |
2,731 |
by IAndre Mon, 2015-10-19 01:19 |
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Problem in refinement job in Docking2 by aninditaseal » Fri, 2016-04-22 07:12 |
1 |
2,456 |
by Sergey Fri, 2016-04-22 11:13 |
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Academic Email by Teo » Tue, 2022-09-06 08:42 |
1 |
742 |
by Sergey Tue, 2022-09-06 11:10 |
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farfar2 error by debostuti » Thu, 2021-10-07 23:10 |
1 |
1,051 |
by everyday847 Fri, 2021-10-08 10:29 |
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Academic email address verification by whu » Thu, 2023-07-06 09:29 |
1 |
282 |
by Sergey Fri, 2023-07-07 10:41 |
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Academic address not verified during Rosie login by Jean-Etienne » Thu, 2022-10-06 22:49 |
1 |
585 |
by Sergey Fri, 2022-10-07 15:26 |
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RMSD by jessye » Tue, 2019-07-02 01:54 |
1 |
2,437 |
by rmoretti Tue, 2019-07-09 09:49 |
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Academic domain not listed by SKlab » Fri, 2022-05-20 12:03 |
1 |
672 |
by Sergey Fri, 2022-05-20 12:14 |
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Antibody scoring by larae » Wed, 2022-06-22 11:14 |
1 |
663 |
by rmoretti Wed, 2022-06-22 12:00 |
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Compaing interface socre of different ligands with the same protein structure by Caulobacter » Tue, 2019-12-10 12:53 |
1 |
1,739 |
by rmoretti Tue, 2019-12-10 13:10 |
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Comparing Protein-Protein Docking interactions between WT and mutant proteins by dflaher » Fri, 2017-11-03 06:18 |
1 |
2,414 |
by rmoretti Fri, 2017-12-01 11:21 |
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GitHub authentication for Rosie by ivmolle » Thu, 2023-01-19 00:21 |
1 |
456 |
by Sergey Thu, 2023-01-19 13:33 |
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Academic email by ruuua » Wed, 2022-08-03 01:45 |
1 |
710 |
by Sergey Thu, 2022-08-04 15:58 |
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academic verification by Rita Melo » Fri, 2023-05-26 07:36 |
1 |
318 |
by Sergey Tue, 2023-05-30 11:31 |
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download decoy structures as .tar file? by deplazes » Fri, 2014-11-21 19:25 |
1 |
3,416 |
by Ashafix Sat, 2014-11-29 07:00 |
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Log in to rosie by dnamkr » Tue, 2022-03-15 11:04 |
1 |
831 |
by Sergey Tue, 2022-03-15 11:28 |
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Academic email verification by victor-calatayud » Mon, 2023-09-18 10:43 |
1 |
205 |
by Sergey Tue, 2023-09-19 13:34 |
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Academic email verification by edgararg » Fri, 2023-11-10 11:03 |
1 |
84 |
by Sergey Fri, 2023-11-10 11:22 |
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Verification via github by Mirosh » Wed, 2023-08-30 21:15 |
1 |
201 |
by rmoretti Thu, 2023-08-31 08:50 |
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free Energy Calculation? by Sduenas » Thu, 2015-06-25 12:18 |
1 |
4,014 |
by rmoretti Fri, 2015-07-03 11:56 |
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Rosie Docking Server-Energy function by jsv » Fri, 2017-07-21 08:26 |
1 |
2,235 |
by ssrb Fri, 2017-07-21 09:29 |
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Academic domain not listed by benjv » Wed, 2022-05-25 10:31 |
1 |
689 |
by Sergey Thu, 2022-05-26 10:23 |
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Protein protein docking by drrahulsuresh » Wed, 2018-05-02 12:52 |
1 |
2,309 |
by smlewis Thu, 2018-05-03 11:45 |
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Login using GitHub by nicotomasini » Mon, 2023-01-30 09:14 |
1 |
520 |
by Sergey Mon, 2023-01-30 12:32 |
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Failure in local docking by Fei » Thu, 2014-06-26 12:24 |
1 |
3,136 |
by rmoretti Tue, 2014-07-01 09:44 |
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Bound Ligand Protein-Protein Docking by ajaniharesh » Mon, 2019-04-08 12:18 |
1 |
1,789 |
by rmoretti Thu, 2019-05-09 13:38 |
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Small molecule ligand docking in RosettaDock-4.0 by hicks139 » Thu, 2023-03-02 09:35 |
1 |
590 |
by rmoretti Thu, 2023-03-02 09:37 |
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Academic E-mail address by Valery Veresov » Wed, 2022-10-05 05:43 |
1 |
581 |
by rmoretti Thu, 2022-10-06 09:18 |
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