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ROSIE FAQ by Sergey » Mon, 2013-04-08 10:41 |
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27,314 |
by G-Jade Fri, 2020-12-18 22:40 |
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Cancel / delete Rosie not working by fglaser » Tue, 2015-07-07 01:14 |
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1,532 |
by fglaser Tue, 2015-07-07 01:14 |
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Transitioning from ROSIE to Rosetta by AdoCbl » Wed, 2015-09-23 11:49 |
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1,487 |
by AdoCbl Wed, 2015-09-23 11:49 |
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Results are NOT emailed by alsayeghkn » Wed, 2022-03-23 08:55 |
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103 |
by alsayeghkn Wed, 2022-03-23 08:55 |
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antibody-antigen interface score by jessye » Sun, 2018-07-01 21:12 |
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1,151 |
by jessye Sun, 2018-07-01 21:12 |
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Symmetric Docking Protocol by Sergey » Tue, 2013-10-29 17:33 |
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5,257 |
by Sergey Mon, 2014-04-21 06:48 |
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ROSIE pKa calculation issue by lijum » Mon, 2020-06-15 12:12 |
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778 |
by lijum Mon, 2020-06-15 12:12 |
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Sequence Tolerance broken links? by dnamkr » Fri, 2021-10-22 11:34 |
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289 |
by dnamkr Fri, 2021-10-22 11:34 |
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Ways to improve both docking2 and symmetric_docking jobs by AdoCbl » Wed, 2015-09-23 14:43 |
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1,524 |
by AdoCbl Wed, 2015-09-23 15:35 |
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Erraser single-residue protocol now open to public by Sergey » Thu, 2012-10-25 18:21 |
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1,889 |
by Sergey Mon, 2014-04-21 06:47 |
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Ligand Docking Protocol now available for academic users by Sergey » Sat, 2014-05-10 14:39 |
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2,005 |
by Sergey Sat, 2014-05-10 14:39 |
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account does not have verified academic email address by haria256 » Sat, 2022-07-02 03:33 |
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30 |
by haria256 Sat, 2022-07-02 03:33 |
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Antibody Job Failed by aquilesms89 » Thu, 2020-08-13 08:50 |
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968 |
by aquilesms89 Thu, 2020-08-13 08:50 |
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Correctly Formatting a PDB file for analysis of a Zinc Finger Motif by rslack » Thu, 2022-04-28 18:19 |
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103 |
by rslack Thu, 2022-04-28 18:38 |
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problem in downloading result from backrub server by ladimafakher » Sun, 2018-07-01 00:50 |
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935 |
by ladimafakher Sun, 2018-07-01 00:50 |
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Relax application before ROSIE by mwinn99 » Wed, 2022-05-25 13:23 |
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94 |
by mwinn99 Wed, 2022-05-25 13:23 |
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Ligand Binding by KS Siddiqui » Thu, 2019-04-25 01:01 |
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903 |
by KS Siddiqui Thu, 2019-04-25 01:01 |
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my status jobs been queued in such longer time by Atirah » Fri, 2020-04-10 02:55 |
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1,048 |
by Atirah Fri, 2020-04-10 02:57 |
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Erraser protocol now open to public by Sergey » Wed, 2012-10-17 12:38 |
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1,928 |
by Sergey Mon, 2014-04-21 06:47 |
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pKa app is now public! by Sergey » Mon, 2014-03-10 15:47 |
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3,407 |
by Sergey Mon, 2014-03-10 15:47 |
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I have jobs queued for nearly 1 month by jessye » Thu, 2019-10-10 03:36 |
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920 |
by jessye Thu, 2019-10-10 03:36 |
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getting right protonation state from PKa of Rosie by hajar » Fri, 2020-07-24 16:24 |
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673 |
by hajar Fri, 2020-07-24 16:24 |
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Problem with ROSIE antibody modeling by wildchipiron » Thu, 2016-04-14 20:00 |
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1,513 |
by wildchipiron Thu, 2016-04-14 20:00 |
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FARFAR2 - Extra Minimize Hangs on Submittal by jvogt » Thu, 2022-06-16 09:41 |
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49 |
by jvogt Thu, 2022-06-16 09:41 |
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Questions about SnugDock result analysis by LTJ » Thu, 2020-07-02 17:41 |
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802 |
by LTJ Thu, 2020-07-02 17:41 |
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ddG_RNA final energy different when modeling WT sequence by AlexLukasiewicz » Tue, 2022-01-25 14:41 |
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223 |
by AlexLukasiewicz Tue, 2022-01-25 14:41 |
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Ways to improve ROSIE docking2 jobs by AdoCbl » Wed, 2015-09-23 15:12 |
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1,483 |
by AdoCbl Wed, 2015-09-23 15:12 |
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Rosetta-Vienna RNP-ddG failed by Athena Chu » Mon, 2022-04-18 18:21 |
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84 |
by Athena Chu Mon, 2022-04-18 18:21 |
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ROSETTA design affinity optimization by wentlewi » Mon, 2020-02-03 01:42 |
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991 |
by wentlewi Mon, 2020-02-03 01:42 |
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Error of non standard amino acid (SnugDock) by bt13d072 » Wed, 2017-03-01 19:51 |
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2,173 |
by rmoretti Mon, 2017-03-06 09:14 |
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Modeling Antibody Structure failed by Sunyp_IM » Sun, 2017-08-06 02:59 |
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1,891 |
by rmoretti Mon, 2017-08-14 15:09 |
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"in_progress" decoy files in some docking2 local_docking job tar archives by AdoCbl » Sun, 2015-10-18 13:47 |
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2,289 |
by rmoretti Sun, 2015-10-18 13:59 |
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Academic address not verified during rosie login by pomden31 » Thu, 2022-05-26 10:04 |
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100 |
by Sergey Thu, 2022-05-26 10:21 |
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error in peptiderive job result by PRITAM » Wed, 2019-05-08 09:33 |
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1,200 |
by rmoretti Mon, 2019-06-24 12:30 |
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antibody modeling fail by jessye » Tue, 2019-07-02 01:57 |
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1,282 |
by rmoretti Wed, 2019-07-10 09:09 |
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academic institution domain is not listed by ruma99 » Tue, 2022-05-24 08:33 |
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116 |
by Sergey Tue, 2022-05-24 10:45 |
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Docking results by sujigeorge1979 » Wed, 2019-06-12 23:40 |
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1,239 |
by jeliazkov Mon, 2019-06-17 06:07 |
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chothia numbering error of FR_L1 by Sbrendle » Mon, 2016-08-22 06:58 |
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1,950 |
by nmarze Mon, 2016-08-22 11:57 |
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RMSD - Score by LT » Thu, 2017-02-23 12:59 |
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2,061 |
by rmoretti Thu, 2017-02-23 13:03 |
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Support for local install of ROSIE? by jjv5 » Mon, 2022-03-21 08:58 |
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165 |
by Sergey Mon, 2022-03-21 12:10 |
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RMSD values for symmetric_docking clockwise vs counterclockwise cyclical outputs by AdoCbl » Sun, 2015-10-18 12:49 |
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2,295 |
by IAndre Mon, 2015-10-19 01:19 |
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Cannot confirm registration to the Rosie site by fglaser » Sun, 2013-10-13 02:52 |
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9,220 |
by Sergey Mon, 2014-04-21 06:48 |
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Problem in refinement job in Docking2 by aninditaseal » Fri, 2016-04-22 07:12 |
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1,980 |
by Sergey Fri, 2016-04-22 11:13 |
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RMSD by jessye » Tue, 2019-07-02 01:54 |
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1,553 |
by rmoretti Tue, 2019-07-09 09:49 |
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farfar2 error by debostuti » Thu, 2021-10-07 23:10 |
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375 |
by everyday847 Fri, 2021-10-08 10:29 |
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Comparing Protein-Protein Docking interactions between WT and mutant proteins by dflaher » Fri, 2017-11-03 06:18 |
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1,868 |
by rmoretti Fri, 2017-12-01 11:21 |
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Academic domain not listed by SKlab » Fri, 2022-05-20 12:03 |
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94 |
by Sergey Fri, 2022-05-20 12:14 |
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Antibody scoring by larae » Wed, 2022-06-22 11:14 |
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61 |
by rmoretti Wed, 2022-06-22 12:00 |
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Compaing interface socre of different ligands with the same protein structure by Caulobacter » Tue, 2019-12-10 12:53 |
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1,109 |
by rmoretti Tue, 2019-12-10 13:10 |
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download decoy structures as .tar file? by deplazes » Fri, 2014-11-21 19:25 |
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2,913 |
by Ashafix Sat, 2014-11-29 07:00 |
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free Energy Calculation? by Sduenas » Thu, 2015-06-25 12:18 |
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3,230 |
by rmoretti Fri, 2015-07-03 11:56 |
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Log in to rosie by dnamkr » Tue, 2022-03-15 11:04 |
1 |
201 |
by Sergey Tue, 2022-03-15 11:28 |
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Rosie Docking Server-Energy function by jsv » Fri, 2017-07-21 08:26 |
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1,674 |
by ssrb Fri, 2017-07-21 09:29 |
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Cannot login ROSIE-2 (docking-3) by Pdk089 » Mon, 2022-04-25 11:30 |
1 |
139 |
by Sergey Mon, 2022-04-25 11:48 |
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Protein protein docking by drrahulsuresh » Wed, 2018-05-02 12:52 |
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1,696 |
by smlewis Thu, 2018-05-03 11:45 |
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Academic domain not listed by benjv » Wed, 2022-05-25 10:31 |
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126 |
by Sergey Thu, 2022-05-26 10:23 |
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Bound Ligand Protein-Protein Docking by ajaniharesh » Mon, 2019-04-08 12:18 |
1 |
1,196 |
by rmoretti Thu, 2019-05-09 13:38 |
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Failure in local docking by Fei » Thu, 2014-06-26 12:24 |
1 |
2,679 |
by rmoretti Tue, 2014-07-01 09:44 |
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Nanobody prediction using ROSIE ? by esozdemir » Thu, 2019-06-20 11:14 |
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1,339 |
by rmoretti Mon, 2019-06-24 12:02 |
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Rosie server stuck?? by David Weis » Sun, 2017-03-05 13:37 |
1 |
1,858 |
by smlewis Mon, 2017-03-06 08:58 |
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Deleting ones "own" guest job a to reduce server load by Protein fan » Thu, 2017-10-26 01:26 |
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1,788 |
by rmoretti Fri, 2017-12-01 11:24 |
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Let docking2 jobs list the scores for the input proteins.pdb file by AdoCbl » Wed, 2015-09-23 12:24 |
1 |
2,281 |
by AdoCbl Thu, 2015-09-24 11:38 |
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Antibody job failed by larae » Fri, 2022-03-25 11:04 |
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146 |
by rmoretti Tue, 2022-03-29 15:14 |
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academic institution domain is not listed by minzhi » Mon, 2022-05-16 14:26 |
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125 |
by Sergey Wed, 2022-05-18 14:05 |
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SNUGDOCK by harsh » Tue, 2018-10-09 23:58 |
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1,525 |
by Sergey Tue, 2018-10-16 15:52 |
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ROSIE antibody modeling- discontinuity in backbone by wagnerek » Tue, 2015-10-27 10:18 |
1 |
2,271 |
by rmoretti Wed, 2015-11-25 12:53 |
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SnugDocking result interpretation by jessye » Mon, 2019-05-27 03:43 |
1 |
1,275 |
by jeliazkov Tue, 2019-05-28 13:36 |
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missing residues while Rosie Modeling by jguan » Mon, 2014-08-11 06:56 |
1 |
3,838 |
by jadolfbr Tue, 2014-10-21 08:46 |
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Prepack step fail in docking2 by gretahultqvist » Thu, 2015-06-11 00:20 |
1 |
2,645 |
by rmoretti Fri, 2015-07-03 12:14 |
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FARFAR2 structure prediction give a circular RNA by jitz » Thu, 2019-07-25 04:58 |
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1,358 |
by everyday847 Mon, 2019-11-11 14:39 |
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SNUGDOCK by adva » Sun, 2017-07-16 00:46 |
1 |
1,578 |
by rmoretti Mon, 2017-07-17 07:57 |
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SnugDock: chain_id H represents more than one chain by tweetman » Wed, 2018-05-02 04:24 |
1 |
1,756 |
by sheehajh Wed, 2018-05-02 06:38 |
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Beta-Peptide Design Protocol now available for academic users by Sergey » Wed, 2012-11-28 12:32 |
1 |
5,949 |
by jaw315 Thu, 2022-06-09 10:26 |
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Academic domains list by aozalevsky » Tue, 2022-05-24 09:24 |
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104 |
by rmoretti Wed, 2022-05-25 08:25 |
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Snugdock versus Docking with an ensemble of protein conformations by MIke Kent » Fri, 2019-03-29 10:07 |
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1,333 |
by jeliazkov Fri, 2019-03-29 10:34 |
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Docking two proteins with interfacing ligand by luisalles » Tue, 2016-04-05 23:56 |
1 |
2,202 |
by rmoretti Fri, 2016-04-29 09:27 |
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Rosie vip function fails on multiple tries by Amy F » Sat, 2019-06-15 12:51 |
1 |
1,174 |
by rmoretti Mon, 2019-06-24 12:20 |
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Rosetta Antibody by Maryam_tabasinezhad » Sun, 2016-08-28 00:29 |
1 |
2,094 |
by smlewis Sun, 2016-08-28 12:04 |
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sequence_tolerance queue stuck by Fred Muskett » Fri, 2021-09-03 08:08 |
2 |
492 |
by line Fri, 2022-02-25 00:40 |
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CDR are not being recognized by wildchipiron » Mon, 2016-05-23 15:03 |
2 |
2,847 |
by nmarze Wed, 2016-05-25 14:54 |
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Output format by Michele Tavanti » Sat, 2015-04-25 05:03 |
2 |
3,086 |
by Conan Sat, 2015-04-25 11:31 |
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proteins.pdb: Not enough chains in submitted protein! [At least 2 chains should be present, found chains: [u'A']...] by Loki01 » Mon, 2018-03-19 13:34 |
2 |
2,218 |
by Loki01 Mon, 2018-03-19 13:45 |
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Academic domain missing by yoann.vial » Wed, 2022-04-13 00:20 |
2 |
158 |
by Sergey Fri, 2022-04-15 10:20 |
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Does Snugdock remodeling of H3 loops include the kink constraint as in RosettaAntibody? by MIke Kent » Wed, 2019-03-27 10:09 |
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1,680 |
by MIke Kent Thu, 2019-03-28 11:26 |
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Problems with the RNA Denovo server by mariaclausen » Tue, 2014-11-25 01:45 |
2 |
3,328 |
by mariaclausen Thu, 2014-11-27 01:30 |
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Supercharge server by alva » Wed, 2014-07-02 17:36 |
2 |
3,736 |
by hooria Mon, 2016-06-13 11:08 |
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How to change your ROSIE username or password? by AdoCbl » Sun, 2015-08-09 00:08 |
2 |
3,360 |
by AdoCbl Tue, 2015-08-18 19:09 |
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My academic institution domain is not listed. by mebigi » Fri, 2022-04-08 07:44 |
2 |
197 |
by mebigi Mon, 2022-04-11 16:35 |
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Docking-Error 500 by edebenedictis » Wed, 2016-08-03 12:34 |
2 |
2,742 |
by Sergey Wed, 2016-08-03 14:21 |
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How to improve ROSIE docking2 results? by AdoCbl » Sun, 2015-08-09 01:22 |
2 |
3,371 |
by AdoCbl Tue, 2015-08-18 19:19 |
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Fnat=NaN in a docking2 job by AdoCbl » Sun, 2015-10-18 12:19 |
2 |
3,357 |
by AdoCbl Sun, 2015-10-18 15:52 |
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FARFAR2 error by lijunnju » Tue, 2020-02-11 08:09 |
2 |
1,707 |
by Lipgloss Mon, 2020-04-20 01:56 |
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pKa job submitting problem by syoifczeri » Tue, 2015-02-17 21:41 |
2 |
3,257 |
by syoifczeri Wed, 2015-02-18 19:15 |
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Stepwise error by debostuti » Wed, 2021-10-06 08:57 |
2 |
378 |
by debostuti Fri, 2021-10-08 00:29 |
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Antibody Server is down by Jogi » Thu, 2012-06-21 04:50 |
2 |
4,763 |
by Sergey Mon, 2014-04-21 06:47 |
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Symmetric Docking Jobs not running by Flaviyan » Wed, 2014-02-05 06:41 |
2 |
5,410 |
by AdoCbl Sat, 2015-08-08 22:38 |
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Linear peptide versus cyclic peptide binding prediction by gabr » Mon, 2019-11-18 12:25 |
2 |
2,017 |
by gabr Tue, 2019-11-19 13:57 |
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supercharge problems by hooria » Tue, 2016-06-14 05:29 |
2 |
2,853 |
by smlewis Wed, 2016-06-15 07:50 |
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Error 500 Docking protein by Sherpaman » Tue, 2014-05-27 01:32 |
2 |
3,404 |
by Sergey Wed, 2014-05-28 13:16 |
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Docking2: Mismatch between score file and graph by Ashafix » Sat, 2014-11-29 07:44 |
2 |
3,457 |
by AdoCbl Sun, 2015-08-09 14:37 |
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