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ROSIE - General
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ROSIE FAQ by Sergey » Mon, 2013-04-08 10:41 |
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23,103 |
by rmoretti Mon, 2018-03-19 12:22 |
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Ways to improve ROSIE docking2 jobs by AdoCbl » Wed, 2015-09-23 15:12 |
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722 |
by AdoCbl Wed, 2015-09-23 15:12 |
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Beta-Peptide Design Protocol now available for academic users by Sergey » Wed, 2012-11-28 12:32 |
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2,350 |
by Sergey Mon, 2014-04-21 06:47 |
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Cancel / delete Rosie not working by fglaser » Tue, 2015-07-07 01:14 |
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795 |
by fglaser Tue, 2015-07-07 01:14 |
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Transitioning from ROSIE to Rosetta by AdoCbl » Wed, 2015-09-23 11:49 |
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732 |
by AdoCbl Wed, 2015-09-23 11:49 |
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antibody-antigen interface score by jessye » Sun, 2018-07-01 21:12 |
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270 |
by jessye Sun, 2018-07-01 21:12 |
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Symmetric Docking Protocol by Sergey » Tue, 2013-10-29 17:33 |
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4,547 |
by Sergey Mon, 2014-04-21 06:48 |
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Ways to improve both docking2 and symmetric_docking jobs by AdoCbl » Wed, 2015-09-23 14:43 |
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751 |
by AdoCbl Wed, 2015-09-23 15:35 |
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Erraser single-residue protocol now open to public by Sergey » Thu, 2012-10-25 18:21 |
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1,228 |
by Sergey Mon, 2014-04-21 06:47 |
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Ligand Docking Protocol now available for academic users by Sergey » Sat, 2014-05-10 14:39 |
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1,253 |
by Sergey Sat, 2014-05-10 14:39 |
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problem in downloading result from backrub server by ladimafakher » Sun, 2018-07-01 00:50 |
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171 |
by ladimafakher Sun, 2018-07-01 00:50 |
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Erraser protocol now open to public by Sergey » Wed, 2012-10-17 12:38 |
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1,221 |
by Sergey Mon, 2014-04-21 06:47 |
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pKa app is now public! by Sergey » Mon, 2014-03-10 15:47 |
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2,681 |
by Sergey Mon, 2014-03-10 15:47 |
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Problem with ROSIE antibody modeling by wildchipiron » Thu, 2016-04-14 20:00 |
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735 |
by wildchipiron Thu, 2016-04-14 20:00 |
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missing residues while Rosie Modeling by jguan » Mon, 2014-08-11 06:56 |
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2,655 |
by jadolfbr Tue, 2014-10-21 08:46 |
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Prepack step fail in docking2 by gretahultqvist » Thu, 2015-06-11 00:20 |
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1,441 |
by rmoretti Fri, 2015-07-03 12:14 |
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SNUGDOCK by adva » Sun, 2017-07-16 00:46 |
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497 |
by rmoretti Mon, 2017-07-17 07:57 |
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SnugDock: chain_id H represents more than one chain by tweetman » Wed, 2018-05-02 04:24 |
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250 |
by sheehajh Wed, 2018-05-02 06:38 |
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Docking two proteins with interfacing ligand by luisalles » Tue, 2016-04-05 23:56 |
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989 |
by rmoretti Fri, 2016-04-29 09:27 |
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Rosetta Antibody by Maryam_tabasinezhad » Sun, 2016-08-28 00:29 |
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905 |
by smlewis Sun, 2016-08-28 12:04 |
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Error of non standard amino acid (SnugDock) by bt13d072 » Wed, 2017-03-01 19:51 |
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790 |
by rmoretti Mon, 2017-03-06 09:14 |
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Modeling Antibody Structure failed by Sunyp_IM » Sun, 2017-08-06 02:59 |
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558 |
by rmoretti Mon, 2017-08-14 15:09 |
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"in_progress" decoy files in some docking2 local_docking job tar archives by AdoCbl » Sun, 2015-10-18 13:47 |
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988 |
by rmoretti Sun, 2015-10-18 13:59 |
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chothia numbering error of FR_L1 by Sbrendle » Mon, 2016-08-22 06:58 |
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788 |
by nmarze Mon, 2016-08-22 11:57 |
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RMSD - Score by LT » Thu, 2017-02-23 12:59 |
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716 |
by rmoretti Thu, 2017-02-23 13:03 |
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RMSD values for symmetric_docking clockwise vs counterclockwise cyclical outputs by AdoCbl » Sun, 2015-10-18 12:49 |
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1,100 |
by IAndre Mon, 2015-10-19 01:19 |
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Cannot confirm registration to the Rosie site by fglaser » Sun, 2013-10-13 02:52 |
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8,005 |
by Sergey Mon, 2014-04-21 06:48 |
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Problem in refinement job in Docking2 by aninditaseal » Fri, 2016-04-22 07:12 |
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790 |
by Sergey Fri, 2016-04-22 11:13 |
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Comparing Protein-Protein Docking interactions between WT and mutant proteins by dflaher » Fri, 2017-11-03 06:18 |
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463 |
by rmoretti Fri, 2017-12-01 11:21 |
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download decoy structures as .tar file? by deplazes » Fri, 2014-11-21 19:25 |
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1,700 |
by Ashafix Sat, 2014-11-29 07:00 |
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free Energy Calculation? by Sduenas » Thu, 2015-06-25 12:18 |
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1,435 |
by rmoretti Fri, 2015-07-03 11:56 |
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Rosie Docking Server-Energy function by jsv » Fri, 2017-07-21 08:26 |
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525 |
by ssrb Fri, 2017-07-21 09:29 |
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Protein protein docking by drrahulsuresh » Wed, 2018-05-02 12:52 |
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302 |
by smlewis Thu, 2018-05-03 11:45 |
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Failure in local docking by Fei » Thu, 2014-06-26 12:24 |
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1,455 |
by rmoretti Tue, 2014-07-01 09:44 |
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Rosie server stuck?? by David Weis » Sun, 2017-03-05 13:37 |
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628 |
by smlewis Mon, 2017-03-06 08:58 |
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Deleting ones "own" guest job a to reduce server load by Protein fan » Thu, 2017-10-26 01:26 |
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507 |
by rmoretti Fri, 2017-12-01 11:24 |
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Let docking2 jobs list the scores for the input proteins.pdb file by AdoCbl » Wed, 2015-09-23 12:24 |
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1,116 |
by AdoCbl Thu, 2015-09-24 11:38 |
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SNUGDOCK by harsh » Tue, 2018-10-09 23:58 |
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211 |
by Sergey Tue, 2018-10-16 15:52 |
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ROSIE antibody modeling- discontinuity in backbone by wagnerek » Tue, 2015-10-27 10:18 |
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1,104 |
by rmoretti Wed, 2015-11-25 12:53 |
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supercharge problems by hooria » Tue, 2016-06-14 05:29 |
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1,286 |
by smlewis Wed, 2016-06-15 07:50 |
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Error 500 Docking protein by Sherpaman » Tue, 2014-05-27 01:32 |
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1,911 |
by Sergey Wed, 2014-05-28 13:16 |
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Docking2: Mismatch between score file and graph by Ashafix » Sat, 2014-11-29 07:44 |
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1,840 |
by AdoCbl Sun, 2015-08-09 14:37 |
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CDR are not being recognized by wildchipiron » Mon, 2016-05-23 15:03 |
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1,290 |
by nmarze Wed, 2016-05-25 14:54 |
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Output format by Michele Tavanti » Sat, 2015-04-25 05:03 |
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1,564 |
by Conan Sat, 2015-04-25 11:31 |
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proteins.pdb: Not enough chains in submitted protein! [At least 2 chains should be present, found chains: [u'A']...] by Loki01 » Mon, 2018-03-19 13:34 |
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423 |
by Loki01 Mon, 2018-03-19 13:45 |
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Problems with the RNA Denovo server by mariaclausen » Tue, 2014-11-25 01:45 |
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1,804 |
by mariaclausen Thu, 2014-11-27 01:30 |
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Antibody prediction with ROSIE failed by Sunyp_IM » Wed, 2017-08-02 23:45 |
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641 |
by Sunyp_IM Thu, 2017-08-03 19:16 |
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Supercharge server by alva » Wed, 2014-07-02 17:36 |
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1,948 |
by hooria Mon, 2016-06-13 11:08 |
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How to change your ROSIE username or password? by AdoCbl » Sun, 2015-08-09 00:08 |
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1,641 |
by AdoCbl Tue, 2015-08-18 19:09 |
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Docking-Error 500 by edebenedictis » Wed, 2016-08-03 12:34 |
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1,096 |
by Sergey Wed, 2016-08-03 14:21 |
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How to improve ROSIE docking2 results? by AdoCbl » Sun, 2015-08-09 01:22 |
2 |
1,710 |
by AdoCbl Tue, 2015-08-18 19:19 |
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Fnat=NaN in a docking2 job by AdoCbl » Sun, 2015-10-18 12:19 |
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1,477 |
by AdoCbl Sun, 2015-10-18 15:52 |
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pKa job submitting problem by syoifczeri » Tue, 2015-02-17 21:41 |
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1,674 |
by syoifczeri Wed, 2015-02-18 19:15 |
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Antibody Server is down by Jogi » Thu, 2012-06-21 04:50 |
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3,194 |
by Sergey Mon, 2014-04-21 06:47 |
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Symmetric Docking Jobs not running by Flaviyan » Wed, 2014-02-05 06:41 |
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3,848 |
by AdoCbl Sat, 2015-08-08 22:38 |
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problems with docking by msironi » Thu, 2016-10-27 00:46 |
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1,289 |
by Sergey Mon, 2016-11-21 11:03 |
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Fv modelling Job Mab_Top 「№33253」 by pr.henriques » Wed, 2017-07-12 03:13 |
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808 |
by rmoretti Thu, 2017-07-13 15:19 |
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Job 「№15623」has failed by fglaser » Tue, 2015-07-07 00:17 |
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2,426 |
by rmoretti Tue, 2015-07-14 14:35 |
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Can you change background color of pdb file pictures? by AdoCbl » Sun, 2015-08-09 01:47 |
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2,172 |
by AdoCbl Tue, 2015-08-18 19:17 |
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peptiderive problem by Fatemeh Arabi » Fri, 2016-10-14 02:54 |
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1,289 |
by Sergey Mon, 2016-11-14 14:48 |
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Numbering failed by Sbrendle » Mon, 2017-06-05 08:07 |
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930 |
by rmoretti Thu, 2017-06-29 07:58 |
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docking2: will the real prepacked PDB stand up? by David Weis » Tue, 2017-02-21 10:04 |
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1,030 |
by rmoretti Tue, 2017-02-28 08:34 |
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docking2: local_docking vs docking_local_refine by AdoCbl » Sat, 2015-08-08 23:57 |
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2,176 |
by AdoCbl Wed, 2015-08-26 19:44 |
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RMSD values in docking2 and symmetric_docking runs by AdoCbl » Sun, 2015-08-09 00:48 |
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2,953 |
by rmoretti Fri, 2015-09-04 13:57 |
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Ways to improve ROSIE symmetric_docking jobs by AdoCbl » Wed, 2015-09-23 13:39 |
4 |
2,576 |
by IAndre Tue, 2015-09-29 08:10 |
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docking2 results seem to not have contacting residues by wagnerek » Tue, 2015-10-27 10:30 |
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2,388 |
by AdoCbl Sun, 2015-11-15 08:10 |
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A table of residue-residue pair energies for residues which interact across the docking interface missing in output by awaring » Mon, 2013-04-22 14:47 |
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6,025 |
by smlewis Mon, 2014-04-21 06:47 |
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Ligand docking error Could not find essential file trigger-00001.ligand_docking_protocol by iphan » Mon, 2016-09-12 10:58 |
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2,080 |
by rmoretti Mon, 2016-10-03 10:44 |
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LIGAND APPEARS TO BE DOCKED INTO EMPTY SPACE by gabeliluo1 » Wed, 2016-01-06 16:23 |
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2,763 |
by rmoretti Thu, 2016-02-04 07:39 |
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Sequence Tolerance Failed by Dstork » Tue, 2017-01-03 07:13 |
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1,922 |
by Sergey Mon, 2017-01-09 16:37 |
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how can i refine protein loop region contain nonstandard amino acid morespecifically Phosphoserine and phosphothreonine by jai_INMAS » Thu, 2014-08-07 01:49 |
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5,238 |
by jai_INMAS Fri, 2014-08-15 08:02 |
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Rosie Server Docking2, wrong plots output? by Conan » Tue, 2015-04-21 12:18 |
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3,688 |
by AdoCbl Sun, 2015-08-09 14:38 |
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Regarding snugdock Ag-Ab score by ss » Mon, 2018-12-10 14:47 |
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233 |
by ss Thu, 2019-01-03 09:08 |
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Score and I_sc in ROSIE symmetric_docking output by AdoCbl » Sun, 2015-08-09 00:26 |
11 |
5,721 |
by rmoretti Tue, 2015-11-24 16:33 |
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