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Rosetta++ - General

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Sticky topic Sticky: READ ME FIRST
by rmoretti » Fri, 2015-09-04 15:23
1
2,498 by rmoretti
Tue, 2017-06-20 08:48
Normal topic weighted constraints
by mintseris » Mon, 2014-02-03 15:24
3
2,688 by rmoretti
Thu, 2014-02-06 09:06
Normal topic How to allow rosetta to recognize the ASP and protonated ASP?
by Jeffrey_Chen » Mon, 2014-03-24 00:41
2
1,439 by Jeffrey_Chen
Tue, 2014-03-25 23:29
Normal topic Consistency of interface DDG calculations
by JuliusSu » Sun, 2014-03-30 21:35
0
1,001 by JuliusSu
Sun, 2014-03-30 21:35
Normal topic running multiple instances of rosetta
by yiliu » Thu, 2008-01-10 08:39
2
1,825 by kosa
Mon, 2014-04-21 06:47
Normal topic Examples in RosettaDock tutorials
by yiliu » Thu, 2008-01-10 08:27
1
1,690 by yiliu
Mon, 2014-04-21 06:47
Normal topic rg cutoff
by yiliu » Thu, 2008-01-10 08:46
1
1,285 by yiliu
Mon, 2014-04-21 06:47
Normal topic help!!!
by yiliu » Thu, 2008-01-10 08:33
1
1,151 by yiliu
Mon, 2014-04-21 06:47
Normal topic Constraints on residue size
by yiliu » Thu, 2008-01-10 08:44
1
1,141 by yiliu
Mon, 2014-04-21 06:47
Normal topic module reconstruct_PDB_by_index module reconstruct_PDB_by_index
by yiliu » Thu, 2008-01-10 08:30
1
1,212 by yiliu
Mon, 2014-04-21 06:47
Normal topic Difference between Eres, Ereduce, Enew?
by yiliu » Thu, 2008-01-10 08:48
1
1,601 by yiliu
Mon, 2014-04-21 06:47
Normal topic How do you refine the native structure?
by yiliu » Thu, 2008-01-10 08:40
1
1,411 by yiliu
Mon, 2014-04-21 06:47
Normal topic ulfated tyrosine in Rosetta
by yiliu » Thu, 2008-01-10 08:29
1
1,222 by yiliu
Mon, 2014-04-21 06:47
Normal topic multiple_processor
by yiliu » Thu, 2008-01-10 08:47
1
1,230 by yiliu
Mon, 2014-04-21 06:47
Normal topic Rosetta 2.1.1 troubleshooting
by yiliu » Thu, 2008-01-10 08:51
1
1,611 by yiliu
Mon, 2014-04-21 06:47
Normal topic how long does it take?
by Piter_ » Thu, 2008-05-15 06:10
1
1,166 by Elin
Mon, 2014-04-21 06:47
Normal topic some posts from old forum
by admin » Tue, 2008-04-22 11:05
0
1,578 by admin
Mon, 2014-04-21 06:47
Normal topic pNNMAKE and loops zone file
by yiliu » Thu, 2008-01-10 08:49
1
1,177 by yiliu
Mon, 2014-04-21 06:47
Normal topic how do you test if your rosetta.xxx is indeed correctly built?
by tru » Thu, 2008-04-24 08:04
4
3,693 by tru
Mon, 2014-04-21 06:47
Normal topic working with silent output - mergin, clustering and extracting
by kosa » Thu, 2008-05-15 05:54
1
1,506 by yiliu
Mon, 2014-04-21 06:47
Normal topic Rosetta and Membrane Proteins
by admin » Fri, 2008-04-18 15:26
1
1,213 by admin
Mon, 2014-04-21 06:47
Normal topic make_fragment
by icb_bio » Tue, 2008-05-06 22:12
7
4,732 by aork
Mon, 2014-04-21 06:47
Normal topic ERROR:: Can't find starting structure: ../prepack/test.pdb
by tru » Thu, 2008-04-24 07:25
4
3,316 by yiliu
Mon, 2014-04-21 06:47
Normal topic capping termini
by luanna » Mon, 2008-05-12 10:50
1
1,464 by yiliu
Mon, 2014-04-21 06:47
Normal topic question about file: cluster_info_silent
by admin » Fri, 2008-04-18 15:19
4
2,354 by ndousis
Mon, 2014-04-21 06:47
Normal topic Loop modeling with multiple chains
by sonyadave » Tue, 2008-05-06 13:44
3
2,756 by sonyadave
Mon, 2014-04-21 06:47
Normal topic Rosetta for Windows
by jp » Wed, 2008-04-23 23:38
2
6,081 by yiliu
Mon, 2014-04-21 06:47
Normal topic clustering_decoy
by icb_bio » Thu, 2008-05-08 18:34
14
5,307 by kosa
Mon, 2014-04-21 06:47
Normal topic all-atom modelling and clustering
by danzinho » Fri, 2008-07-25 02:02
2
1,427 by danzinho
Mon, 2014-04-21 06:47
Normal topic command lines for rebuilding-and-refinement protocol
by Temsiri » Fri, 2008-08-29 08:54
2
1,605 by Temsiri
Mon, 2014-04-21 06:47
Normal topic membrane protein docking
by angel » Thu, 2008-10-23 08:50
2
2,053 by yiliu
Mon, 2014-04-21 06:47
Normal topic How to reconstruct full atom structure from silent file
by kosa » Mon, 2008-06-23 07:25
7
4,206 by yiliu
Mon, 2014-04-21 06:47
Normal topic Linux Distros and Settings
by Brev » Tue, 2008-08-19 17:48
2
2,363 by sdarnell
Mon, 2014-04-21 06:47
Normal topic Computing ddg_binding
by hetu » Mon, 2008-09-29 19:11
1
1,301 by yiliu
Mon, 2014-04-21 06:47
Normal topic Timer
by Temsiri » Sun, 2008-11-09 06:57
0
877 by Temsiri
Mon, 2014-04-21 06:47
Normal topic Compiles fine but seg faults on everything
by mckinneys » Thu, 2008-07-24 12:28
1
1,147 by yiliu
Mon, 2014-04-21 06:47
Normal topic ab initio with restraint
by Elin » Thu, 2008-08-28 18:42
2
1,645 by Elin
Mon, 2014-04-21 06:47
Normal topic RosettaDock: questions about Fab file and constraints
by lucasimonelli » Thu, 2008-10-09 05:57
3
1,970 by yiliu
Mon, 2014-04-21 06:47
Normal topic Increase compactness of decoys
by kosa » Sat, 2008-06-21 12:47
5
2,279 by kosa
Mon, 2014-04-21 06:47
Normal topic MPI Rosetta
by pager2 » Fri, 2008-08-01 08:13
1
2,154 by yiliu
Mon, 2014-04-21 06:47
Normal topic RosettaDock and -flex_peptide
by pshannon » Tue, 2008-09-16 17:56
1
1,186 by yiliu
Mon, 2014-04-21 06:47
Normal topic how do I repeat relax runs and get scoring functions at every state
by Temsiri » Mon, 2008-11-03 19:42
3
1,792 by vanita
Mon, 2014-04-21 06:47
Normal topic How to dock structures locally?
by rwn » Thu, 2008-05-15 07:26
1
1,325 by yiliu
Mon, 2014-04-21 06:47
Normal topic MinGW build problem
by tlmcraig » Thu, 2008-08-21 12:22
1
2,235 by yiliu
Mon, 2014-04-21 06:47
Normal topic how to get around no sequence for de novo design?
by neilcifer » Mon, 2008-10-06 15:01
3
1,985 by huxz
Mon, 2014-04-21 06:47
Normal topic abinitio modeling
by vamsi » Mon, 2008-11-17 12:13
1
1,169 by yiliu
Mon, 2014-04-21 06:47
Normal topic about SASA interpretation
by tarajano » Fri, 2008-06-20 10:17
2
1,971 by tarajano
Mon, 2014-04-21 06:47
Normal topic fragment generation - local vs server
by danzinho » Fri, 2008-07-25 02:09
1
1,415 by yiliu
Mon, 2014-04-21 06:47
Normal topic docking search: first residue centroids, then full atom?
by pshannon » Wed, 2008-09-03 15:46
1
1,438 by yiliu
Mon, 2014-04-21 06:47
Normal topic building parallel Rosetta 2.3 on a 64-bit machine
by dwoods » Mon, 2008-10-27 11:21
0
986 by dwoods
Mon, 2014-04-21 06:47
Normal topic Single or multiple decoys from relax?
by kosa » Thu, 2008-05-15 06:11
2
1,580 by kosa
Mon, 2014-04-21 06:47
Normal topic RosettaDesign parameters
by gbeckham » Tue, 2008-07-01 18:03
4
2,528 by yiliu
Mon, 2014-04-21 06:47
Normal topic Deb or rpm files?
by tlmcraig » Wed, 2008-08-20 23:24
0
927 by tlmcraig
Mon, 2014-04-21 06:47
Normal topic Unable to determine sequence length from pdb file
by imartins » Tue, 2008-09-30 11:50
0
933 by imartins
Mon, 2014-04-21 06:47
Normal topic GTP-bound proteins
by mbh » Thu, 2008-11-13 11:35
1
1,244 by yiliu
Mon, 2014-04-21 06:47
Normal topic Missing make options for 64-bit platforms in RosettaBundle-2.3.0.gz
by dean » Fri, 2008-06-06 04:17
2
1,566 by rmosca
Mon, 2014-04-21 06:47
Normal topic Rosetta doesn't read the starting structure - solved
by Bob3k » Fri, 2009-02-06 02:00
4
4,144 by Bob3k
Mon, 2014-04-21 06:47
Normal topic RosettaDesign (each run produces the same sequence with many GLY residues )
by shirleyzheng » Wed, 2009-05-13 10:25
4
3,873 by shirleyzheng
Mon, 2014-04-21 06:47
Normal topic Prepacking structures using RosettaDock on a Windows platform
by suj88 » Fri, 2009-03-13 14:20
1
2,819 by suj88
Mon, 2014-04-21 06:47
Normal topic Which vall version are make_fragment based on?
by lennylv » Thu, 2009-04-02 05:00
0
1,303 by lennylv
Mon, 2014-04-21 06:47
Normal topic Help with flexible backbone design
by neilcifer » Thu, 2008-11-20 10:45
0
1,182 by neilcifer
Mon, 2014-04-21 06:47
Normal topic modelling loops and inserted domains
by danzinho » Fri, 2009-01-16 02:14
6
4,644 by wenchangyu2008
Mon, 2014-04-21 06:47
Normal topic Cluster methodology
by TiagoGomes » Wed, 2009-04-29 11:53
0
1,491 by TiagoGomes
Mon, 2014-04-21 06:47
Normal topic Compilation Error 1 after 'make gcc' command
by suj88 » Wed, 2009-02-25 14:24
1
4,797 by Bob3k
Mon, 2014-04-21 06:47
Normal topic RosettaDock with loop rebuild HOWTO ?
by lcavallo » Thu, 2009-06-04 09:12
4
3,264 by mchldln
Mon, 2014-04-21 06:47
Normal topic Alanine Scanning of UbcH7- E6AP Interface
by suj88 » Mon, 2009-03-23 15:58
1
2,303 by kristiankrantz
Mon, 2014-04-21 06:47
Normal topic Side chain sampling
by mayo » Wed, 2009-04-15 10:14
1
1,838 by kaufmann
Mon, 2014-04-21 06:47
Normal topic abinitio
by vamsi » Fri, 2008-11-21 12:21
0
1,085 by vamsi
Mon, 2014-04-21 06:47
Normal topic N-terminus and loops
by sreiling » Thu, 2009-01-29 08:27
3
2,470 by vanita
Mon, 2014-04-21 06:47
Normal topic Flexible-backbone Rosetta design (partial flexibility)
by shirleyzheng » Mon, 2009-05-11 11:27
1
1,840 by marthapedraza
Mon, 2014-04-21 06:47
Normal topic Rosetta hangs while generating decoys
by lcavallo » Sat, 2009-03-07 02:11
0
1,433 by lcavallo
Mon, 2014-04-21 06:47
Normal topic Rosetta Loop Modeling error
by mdyini » Tue, 2009-03-31 15:22
1
1,611 by vanita
Mon, 2014-04-21 06:47
Normal topic Rosetta-2.3.0 build on fedora 9
by akneoh » Mon, 2008-11-17 16:22
1
1,848 by Temsiri
Mon, 2014-04-21 06:47
Normal topic Installation report and instructions: Ubuntu 8.10 64 bit
by TamirEr » Mon, 2009-01-12 11:18
4
4,845 by chinhsutran
Mon, 2014-04-21 06:47
Normal topic Input files of RosettaDNA mode
by r96631028 » Tue, 2009-04-28 04:39
0
1,321 by r96631028
Mon, 2014-04-21 06:47
Normal topic program not terminating...
by atoler » Wed, 2009-02-25 06:40
2
1,948 by atoler
Mon, 2014-04-21 06:47
Normal topic Barcode constraint file
by rkhayat » Fri, 2009-05-15 16:02
1
1,747 by davidk
Mon, 2014-04-21 06:47
Normal topic starting sequence with flexible backbone design
by kmaksim » Mon, 2009-03-23 07:10
1
1,564 by vanita
Mon, 2014-04-21 06:47
Normal topic Docking Protocol ERROR
by bwp » Wed, 2009-04-08 08:41
0
1,238 by bwp
Mon, 2014-04-21 06:47
Normal topic Using -fibril mode
by jiyongpark.77 » Thu, 2008-11-20 19:18
1
1,452 by jiyongpark.77
Mon, 2014-04-21 06:47
Normal topic Rosetta Academic Workshop Series
by xavier » Mon, 2009-01-26 11:50
0
1,816 by xavier
Mon, 2014-04-21 06:47
Normal topic got here mapping777777 -1 at ~/rosetta/antibody/scripts/ram_blastscript.pl line 10
by wtscrystal » Mon, 2009-05-04 06:08
0
1,332 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic rosetta reproducibility
by lcavallo » Thu, 2009-03-05 02:55
2
2,376 by lcavallo
Mon, 2014-04-21 06:47
Normal topic distance restrain rosetta 2.3
by sgrigna » Wed, 2009-03-25 08:42
1
1,701 by vanita
Mon, 2014-04-21 06:47
Normal topic cluster.pl fails to extract best centers
by rmosca » Tue, 2008-12-02 03:10
1
1,575 by yiliu
Mon, 2014-04-21 06:47
Normal topic Compiling Mpilan option
by TiagoGomes » Tue, 2009-04-21 05:34
0
1,244 by TiagoGomes
Mon, 2014-04-21 06:47
Normal topic icc versus gcc and 64bit versus 32bit performances
by lcavallo » Fri, 2009-02-20 15:29
0
1,207 by lcavallo
Mon, 2014-04-21 06:47
Normal topic How to set gcc optimization level with scons to compile 64bit rosetta-2.3.0
by hazards » Fri, 2009-05-15 14:16
0
2,926 by hazards
Mon, 2014-04-21 06:47
Normal topic Getting the scorefilter value from a calibration run
by lcavallo » Fri, 2009-03-20 06:18
0
1,232 by lcavallo
Mon, 2014-04-21 06:47
Normal topic To apply distance constraint to MULTIPLE residue pairs, what's the format?
by shirleyzheng » Mon, 2009-04-06 10:24
8
6,828 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic Build Problem on 64 bit Gentoo
by spetzjoe » Thu, 2008-11-20 12:24
3
2,958 by dberkholz
Mon, 2014-04-21 06:47
Normal topic disulphides are only sometimes formed
by danzinho » Mon, 2009-01-19 08:42
1
1,572 by yiliu
Mon, 2014-04-21 06:47
Normal topic rosetta3 compliation
by sdh » Mon, 2009-05-04 03:16
0
1,215 by sdh
Mon, 2014-04-21 06:47
Normal topic Docking with pose_loops - frustration!
by mchldln » Wed, 2009-06-10 08:44
2
2,103 by mchldln
Mon, 2014-04-21 06:47
Normal topic problems building rosetta 2.3.0 with icc
by lcavallo » Wed, 2009-03-04 05:32
0
1,472 by lcavallo
Mon, 2014-04-21 06:47
Normal topic test.fasta and test.dat files are not available in Rosetta2.3.0
by suj88 » Mon, 2009-03-23 17:14
1
1,644 by yiliu
Mon, 2014-04-21 06:47
Normal topic Fragment files for incomplet protein
by globalcoco » Sat, 2009-04-18 05:16
1
1,715 by vanita
Mon, 2014-04-21 06:47
Normal topic Ab Initio
by vamsi » Fri, 2008-11-21 12:42
2
2,290 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Subclusters - what are they?
by Bob3k » Mon, 2009-06-15 05:58
0
1,481 by Bob3k
Mon, 2014-04-21 06:47
Normal topic pose_ligand_docking? and constraint file...
by mdyini » Wed, 2009-07-01 20:13
0
1,391 by mdyini
Mon, 2014-04-21 06:47
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