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Rosetta++ - General
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READ ME FIRST by rmoretti » Fri, 2015-09-04 15:23 |
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3,119 |
by rmoretti Tue, 2017-06-20 08:48 |
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weighted constraints by mintseris » Mon, 2014-02-03 15:24 |
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3,565 |
by rmoretti Thu, 2014-02-06 09:06 |
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How to allow rosetta to recognize the ASP and protonated ASP? by Jeffrey_Chen » Mon, 2014-03-24 00:41 |
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1,977 |
by Jeffrey_Chen Tue, 2014-03-25 23:29 |
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Consistency of interface DDG calculations by JuliusSu » Sun, 2014-03-30 21:35 |
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1,275 |
by JuliusSu Sun, 2014-03-30 21:35 |
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How do you refine the native structure? by yiliu » Thu, 2008-01-10 08:40 |
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1,863 |
by yiliu Mon, 2014-04-21 06:47 |
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ulfated tyrosine in Rosetta by yiliu » Thu, 2008-01-10 08:29 |
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1,718 |
by yiliu Mon, 2014-04-21 06:47 |
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multiple_processor by yiliu » Thu, 2008-01-10 08:47 |
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1,665 |
by yiliu Mon, 2014-04-21 06:47 |
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running multiple instances of rosetta by yiliu » Thu, 2008-01-10 08:39 |
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2,417 |
by kosa Mon, 2014-04-21 06:47 |
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Examples in RosettaDock tutorials by yiliu » Thu, 2008-01-10 08:27 |
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2,168 |
by yiliu Mon, 2014-04-21 06:47 |
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rg cutoff by yiliu » Thu, 2008-01-10 08:46 |
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1,723 |
by yiliu Mon, 2014-04-21 06:47 |
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help!!! by yiliu » Thu, 2008-01-10 08:33 |
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1,591 |
by yiliu Mon, 2014-04-21 06:47 |
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Constraints on residue size by yiliu » Thu, 2008-01-10 08:44 |
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1,538 |
by yiliu Mon, 2014-04-21 06:47 |
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module reconstruct_PDB_by_index
module reconstruct_PDB_by_index by yiliu » Thu, 2008-01-10 08:30 |
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1,642 |
by yiliu Mon, 2014-04-21 06:47 |
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Difference between Eres, Ereduce, Enew? by yiliu » Thu, 2008-01-10 08:48 |
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2,091 |
by yiliu Mon, 2014-04-21 06:47 |
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question about file: cluster_info_silent by admin » Fri, 2008-04-18 15:19 |
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3,258 |
by ndousis Mon, 2014-04-21 06:47 |
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Loop modeling with multiple chains by sonyadave » Tue, 2008-05-06 13:44 |
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3,624 |
by sonyadave Mon, 2014-04-21 06:47 |
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Rosetta for Windows by jp » Wed, 2008-04-23 23:38 |
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7,025 |
by yiliu Mon, 2014-04-21 06:47 |
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clustering_decoy by icb_bio » Thu, 2008-05-08 18:34 |
14 |
7,992 |
by kosa Mon, 2014-04-21 06:47 |
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Rosetta 2.1.1 troubleshooting by yiliu » Thu, 2008-01-10 08:51 |
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2,062 |
by yiliu Mon, 2014-04-21 06:47 |
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how long does it take? by Piter_ » Thu, 2008-05-15 06:10 |
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1,599 |
by Elin Mon, 2014-04-21 06:47 |
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some posts from old forum by admin » Tue, 2008-04-22 11:05 |
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2,048 |
by admin Mon, 2014-04-21 06:47 |
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pNNMAKE and loops zone file by yiliu » Thu, 2008-01-10 08:49 |
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1,621 |
by yiliu Mon, 2014-04-21 06:47 |
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how do you test if your rosetta.xxx is indeed correctly built? by tru » Thu, 2008-04-24 08:04 |
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4,568 |
by tru Mon, 2014-04-21 06:47 |
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working with silent output - mergin, clustering and extracting by kosa » Thu, 2008-05-15 05:54 |
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1,927 |
by yiliu Mon, 2014-04-21 06:47 |
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Rosetta and Membrane Proteins by admin » Fri, 2008-04-18 15:26 |
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1,656 |
by admin Mon, 2014-04-21 06:47 |
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make_fragment by icb_bio » Tue, 2008-05-06 22:12 |
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6,373 |
by aork Mon, 2014-04-21 06:47 |
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ERROR:: Can't find starting structure: ../prepack/test.pdb by tru » Thu, 2008-04-24 07:25 |
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4,550 |
by yiliu Mon, 2014-04-21 06:47 |
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capping termini by luanna » Mon, 2008-05-12 10:50 |
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1,906 |
by yiliu Mon, 2014-04-21 06:47 |
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about SASA interpretation by tarajano » Fri, 2008-06-20 10:17 |
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2,658 |
by tarajano Mon, 2014-04-21 06:47 |
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fragment generation - local vs server by danzinho » Fri, 2008-07-25 02:09 |
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1,826 |
by yiliu Mon, 2014-04-21 06:47 |
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docking search: first residue centroids, then full atom? by pshannon » Wed, 2008-09-03 15:46 |
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1,859 |
by yiliu Mon, 2014-04-21 06:47 |
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building parallel Rosetta 2.3 on a 64-bit machine by dwoods » Mon, 2008-10-27 11:21 |
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1,294 |
by dwoods Mon, 2014-04-21 06:47 |
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Single or multiple decoys from relax? by kosa » Thu, 2008-05-15 06:11 |
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2,203 |
by kosa Mon, 2014-04-21 06:47 |
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RosettaDesign parameters by gbeckham » Tue, 2008-07-01 18:03 |
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3,431 |
by yiliu Mon, 2014-04-21 06:47 |
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Deb or rpm files? by tlmcraig » Wed, 2008-08-20 23:24 |
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1,192 |
by tlmcraig Mon, 2014-04-21 06:47 |
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Unable to determine sequence length from pdb file by imartins » Tue, 2008-09-30 11:50 |
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1,203 |
by imartins Mon, 2014-04-21 06:47 |
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GTP-bound proteins by mbh » Thu, 2008-11-13 11:35 |
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1,676 |
by yiliu Mon, 2014-04-21 06:47 |
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Missing make options for 64-bit platforms in RosettaBundle-2.3.0.gz by dean » Fri, 2008-06-06 04:17 |
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2,129 |
by rmosca Mon, 2014-04-21 06:47 |
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all-atom modelling and clustering by danzinho » Fri, 2008-07-25 02:02 |
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2,020 |
by danzinho Mon, 2014-04-21 06:47 |
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command lines for rebuilding-and-refinement protocol by Temsiri » Fri, 2008-08-29 08:54 |
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2,180 |
by Temsiri Mon, 2014-04-21 06:47 |
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membrane protein docking by angel » Thu, 2008-10-23 08:50 |
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2,661 |
by yiliu Mon, 2014-04-21 06:47 |
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How to reconstruct full atom structure from silent file by kosa » Mon, 2008-06-23 07:25 |
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5,651 |
by yiliu Mon, 2014-04-21 06:47 |
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Linux Distros and Settings by Brev » Tue, 2008-08-19 17:48 |
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3,058 |
by sdarnell Mon, 2014-04-21 06:47 |
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Computing ddg_binding by hetu » Mon, 2008-09-29 19:11 |
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1,874 |
by yiliu Mon, 2014-04-21 06:47 |
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Timer by Temsiri » Sun, 2008-11-09 06:57 |
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1,137 |
by Temsiri Mon, 2014-04-21 06:47 |
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Compiles fine but seg faults on everything by mckinneys » Thu, 2008-07-24 12:28 |
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1,593 |
by yiliu Mon, 2014-04-21 06:47 |
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ab initio with restraint by Elin » Thu, 2008-08-28 18:42 |
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2,258 |
by Elin Mon, 2014-04-21 06:47 |
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RosettaDock: questions about Fab file and constraints by lucasimonelli » Thu, 2008-10-09 05:57 |
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2,700 |
by yiliu Mon, 2014-04-21 06:47 |
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Increase compactness of decoys by kosa » Sat, 2008-06-21 12:47 |
5 |
3,396 |
by kosa Mon, 2014-04-21 06:47 |
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MPI Rosetta by pager2 » Fri, 2008-08-01 08:13 |
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2,706 |
by yiliu Mon, 2014-04-21 06:47 |
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RosettaDock and -flex_peptide by pshannon » Tue, 2008-09-16 17:56 |
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1,603 |
by yiliu Mon, 2014-04-21 06:47 |
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how do I repeat relax runs and get scoring functions at every state by Temsiri » Mon, 2008-11-03 19:42 |
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2,520 |
by vanita Mon, 2014-04-21 06:47 |
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How to dock structures locally? by rwn » Thu, 2008-05-15 07:26 |
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1,780 |
by yiliu Mon, 2014-04-21 06:47 |
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MinGW build problem by tlmcraig » Thu, 2008-08-21 12:22 |
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2,714 |
by yiliu Mon, 2014-04-21 06:47 |
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how to get around no sequence for de novo design? by neilcifer » Mon, 2008-10-06 15:01 |
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2,747 |
by huxz Mon, 2014-04-21 06:47 |
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abinitio modeling by vamsi » Mon, 2008-11-17 12:13 |
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1,608 |
by yiliu Mon, 2014-04-21 06:47 |
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cluster.pl fails to extract best centers by rmosca » Tue, 2008-12-02 03:10 |
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2,112 |
by yiliu Mon, 2014-04-21 06:47 |
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rosetta3 compliation by sdh » Mon, 2009-05-04 03:16 |
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1,491 |
by sdh Mon, 2014-04-21 06:47 |
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icc versus gcc and 64bit versus 32bit performances by lcavallo » Fri, 2009-02-20 15:29 |
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1,505 |
by lcavallo Mon, 2014-04-21 06:47 |
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Docking with pose_loops - frustration! by mchldln » Wed, 2009-06-10 08:44 |
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2,775 |
by mchldln Mon, 2014-04-21 06:47 |
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Getting the scorefilter value from a calibration run by lcavallo » Fri, 2009-03-20 06:18 |
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1,550 |
by lcavallo Mon, 2014-04-21 06:47 |
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To apply distance constraint to MULTIPLE residue pairs, what's the format? by shirleyzheng » Mon, 2009-04-06 10:24 |
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8,879 |
by wtscrystal Mon, 2014-04-21 06:47 |
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Build Problem on 64 bit Gentoo by spetzjoe » Thu, 2008-11-20 12:24 |
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3,843 |
by dberkholz Mon, 2014-04-21 06:47 |
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disulphides are only sometimes formed by danzinho » Mon, 2009-01-19 08:42 |
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2,056 |
by yiliu Mon, 2014-04-21 06:47 |
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RosettaDesign (each run produces the same sequence with many GLY residues ) by shirleyzheng » Wed, 2009-05-13 10:25 |
4 |
4,929 |
by shirleyzheng Mon, 2014-04-21 06:47 |
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problems building rosetta 2.3.0 with icc by lcavallo » Wed, 2009-03-04 05:32 |
0 |
1,788 |
by lcavallo Mon, 2014-04-21 06:47 |
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test.fasta and test.dat files are not available in Rosetta2.3.0 by suj88 » Mon, 2009-03-23 17:14 |
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2,138 |
by yiliu Mon, 2014-04-21 06:47 |
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Fragment files for incomplet protein by globalcoco » Sat, 2009-04-18 05:16 |
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2,166 |
by vanita Mon, 2014-04-21 06:47 |
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Ab Initio by vamsi » Fri, 2008-11-21 12:42 |
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2,950 |
by rmoretti Mon, 2014-04-21 06:47 |
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Cluster methodology by TiagoGomes » Wed, 2009-04-29 11:53 |
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1,809 |
by TiagoGomes Mon, 2014-04-21 06:47 |
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Rosetta doesn't read the starting structure - solved by Bob3k » Fri, 2009-02-06 02:00 |
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5,256 |
by Bob3k Mon, 2014-04-21 06:47 |
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RosettaDock with loop rebuild HOWTO ? by lcavallo » Thu, 2009-06-04 09:12 |
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4,345 |
by mchldln Mon, 2014-04-21 06:47 |
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Prepacking structures using RosettaDock on a Windows platform by suj88 » Fri, 2009-03-13 14:20 |
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3,314 |
by suj88 Mon, 2014-04-21 06:47 |
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Which vall version are make_fragment based on? by lennylv » Thu, 2009-04-02 05:00 |
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1,595 |
by lennylv Mon, 2014-04-21 06:47 |
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Help with flexible backbone design by neilcifer » Thu, 2008-11-20 10:45 |
0 |
1,501 |
by neilcifer Mon, 2014-04-21 06:47 |
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modelling loops and inserted domains by danzinho » Fri, 2009-01-16 02:14 |
6 |
6,008 |
by wenchangyu2008 Mon, 2014-04-21 06:47 |
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Flexible-backbone Rosetta design (partial flexibility) by shirleyzheng » Mon, 2009-05-11 11:27 |
1 |
2,324 |
by marthapedraza Mon, 2014-04-21 06:47 |
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Compilation Error 1 after 'make gcc' command by suj88 » Wed, 2009-02-25 14:24 |
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5,488 |
by Bob3k Mon, 2014-04-21 06:47 |
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Alanine Scanning of UbcH7- E6AP Interface by suj88 » Mon, 2009-03-23 15:58 |
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2,791 |
by kristiankrantz Mon, 2014-04-21 06:47 |
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Side chain sampling by mayo » Wed, 2009-04-15 10:14 |
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2,353 |
by kaufmann Mon, 2014-04-21 06:47 |
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abinitio by vamsi » Fri, 2008-11-21 12:21 |
0 |
1,383 |
by vamsi Mon, 2014-04-21 06:47 |
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Input files of RosettaDNA mode by r96631028 » Tue, 2009-04-28 04:39 |
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1,617 |
by r96631028 Mon, 2014-04-21 06:47 |
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N-terminus and loops by sreiling » Thu, 2009-01-29 08:27 |
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3,309 |
by vanita Mon, 2014-04-21 06:47 |
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Barcode constraint file by rkhayat » Fri, 2009-05-15 16:02 |
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2,223 |
by davidk Mon, 2014-04-21 06:47 |
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Rosetta hangs while generating decoys by lcavallo » Sat, 2009-03-07 02:11 |
0 |
1,760 |
by lcavallo Mon, 2014-04-21 06:47 |
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Rosetta Loop Modeling error by mdyini » Tue, 2009-03-31 15:22 |
1 |
2,077 |
by vanita Mon, 2014-04-21 06:47 |
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Rosetta-2.3.0 build on fedora 9 by akneoh » Mon, 2008-11-17 16:22 |
1 |
2,364 |
by Temsiri Mon, 2014-04-21 06:47 |
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Installation report and instructions: Ubuntu 8.10 64 bit by TamirEr » Mon, 2009-01-12 11:18 |
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5,874 |
by chinhsutran Mon, 2014-04-21 06:47 |
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got here mapping777777
-1 at ~/rosetta/antibody/scripts/ram_blastscript.pl line 10 by wtscrystal » Mon, 2009-05-04 06:08 |
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1,626 |
by wtscrystal Mon, 2014-04-21 06:47 |
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program not terminating... by atoler » Wed, 2009-02-25 06:40 |
2 |
2,560 |
by atoler Mon, 2014-04-21 06:47 |
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starting sequence with flexible backbone design by kmaksim » Mon, 2009-03-23 07:10 |
1 |
2,061 |
by vanita Mon, 2014-04-21 06:47 |
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Docking Protocol ERROR by bwp » Wed, 2009-04-08 08:41 |
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1,546 |
by bwp Mon, 2014-04-21 06:47 |
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Using -fibril mode by jiyongpark.77 » Thu, 2008-11-20 19:18 |
1 |
1,909 |
by jiyongpark.77 Mon, 2014-04-21 06:47 |
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Compiling Mpilan option by TiagoGomes » Tue, 2009-04-21 05:34 |
0 |
1,545 |
by TiagoGomes Mon, 2014-04-21 06:47 |
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Rosetta Academic Workshop Series by xavier » Mon, 2009-01-26 11:50 |
0 |
2,190 |
by xavier Mon, 2014-04-21 06:47 |
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How to set gcc optimization level with scons to compile 64bit rosetta-2.3.0 by hazards » Fri, 2009-05-15 14:16 |
0 |
3,327 |
by hazards Mon, 2014-04-21 06:47 |
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rosetta reproducibility by lcavallo » Thu, 2009-03-05 02:55 |
2 |
3,048 |
by lcavallo Mon, 2014-04-21 06:47 |
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distance restrain rosetta 2.3 by sgrigna » Wed, 2009-03-25 08:42 |
1 |
2,206 |
by vanita Mon, 2014-04-21 06:47 |
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ligand dock residue selection by Silice » Mon, 2009-08-03 07:54 |
1 |
2,248 |
by Silice Mon, 2014-04-21 06:47 |
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producing good idealized structures by lesi » Thu, 2009-06-18 15:06 |
3 |
3,915 |
by sid Mon, 2014-04-21 06:47 |
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