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Rosetta++ - General
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READ ME FIRST by rmoretti » Fri, 2015-09-04 15:23 |
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4,125 |
by rmoretti Tue, 2017-06-20 08:48 |
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working with silent output - mergin, clustering and extracting by kosa » Thu, 2008-05-15 05:54 |
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2,499 |
by yiliu Mon, 2014-04-21 06:47 |
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Why so wried way? by dikov » Fri, 2010-03-05 04:57 |
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2,655 |
by dikov Mon, 2014-04-21 06:47 |
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Why should I do prepack before docking? by ice_flame » Wed, 2011-11-16 04:12 |
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4,036 |
by ice_flame Mon, 2014-04-21 06:47 |
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Why a paralleled Rosetta perform like a normal one? by ice_flame » Mon, 2011-03-28 22:23 |
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4,634 |
by smlewis Mon, 2014-04-21 06:47 |
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Which vall version are make_fragment based on? by lennylv » Thu, 2009-04-02 05:00 |
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2,030 |
by lennylv Mon, 2014-04-21 06:47 |
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what's the meaning of the Ab-Ag Dock with RosettaDock by huairpan » Thu, 2009-10-15 23:26 |
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4,411 |
by huairpan Mon, 2014-04-21 06:47 |
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What's the difference between F and S labeled decoys? by PaulaBanks » Mon, 2013-08-26 23:44 |
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2,855 |
by rmoretti Mon, 2014-04-21 06:48 |
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what is the F() in rosetta 2.3 by Lindsay » Fri, 2012-06-08 14:44 |
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2,990 |
by smlewis Mon, 2014-04-21 06:47 |
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weighted constraints by mintseris » Mon, 2014-02-03 15:24 |
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4,620 |
by rmoretti Thu, 2014-02-06 09:06 |
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Using dipolar coupling restraints in Rosetta v2.3 by pager2 » Mon, 2010-03-08 14:54 |
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2,568 |
by pager2 Mon, 2014-04-21 06:47 |
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Using -fibril mode by jiyongpark.77 » Thu, 2008-11-20 19:18 |
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2,606 |
by jiyongpark.77 Mon, 2014-04-21 06:47 |
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use of constraints by anusmita_sahoo » Thu, 2010-06-10 10:54 |
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2,217 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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Unrecognized Residues in RosettaDock by mboggara » Sat, 2010-03-20 19:48 |
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2,370 |
by mboggara Mon, 2014-04-21 06:47 |
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Unable to determine sequence length from pdb file by imartins » Tue, 2008-09-30 11:50 |
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1,557 |
by imartins Mon, 2014-04-21 06:47 |
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ulfated tyrosine in Rosetta by yiliu » Thu, 2008-01-10 08:29 |
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2,279 |
by yiliu Mon, 2014-04-21 06:47 |
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To apply distance constraint to MULTIPLE residue pairs, what's the format? by shirleyzheng » Mon, 2009-04-06 10:24 |
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11,349 |
by wtscrystal Mon, 2014-04-21 06:47 |
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To add/include unusual amino acids in RosettaDesign by shirleyzheng » Mon, 2009-07-06 09:34 |
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2,180 |
by shirleyzheng Mon, 2014-04-21 06:47 |
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Timer by Temsiri » Sun, 2008-11-09 06:57 |
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1,506 |
by Temsiri Mon, 2014-04-21 06:47 |
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the energy terms in fixbb by tianbu » Sun, 2012-07-29 12:48 |
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6,652 |
by tianbu Mon, 2014-04-21 06:47 |
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test.fasta and test.dat files are not available in Rosetta2.3.0 by suj88 » Mon, 2009-03-23 17:14 |
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2,902 |
by yiliu Mon, 2014-04-21 06:47 |
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terminus capping by mbellows » Wed, 2009-10-07 11:16 |
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3,716 |
by mboggara Mon, 2014-04-21 06:47 |
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Symmetric local protein docking by efratmas » Mon, 2011-01-17 04:52 |
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3,146 |
by smlewis Mon, 2014-04-21 06:47 |
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symmetric design in rosetta3 by sdh » Wed, 2009-07-08 07:30 |
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3,191 |
by smlewis Mon, 2014-04-21 06:47 |
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Subclusters - what are they? by Bob3k » Mon, 2009-06-15 05:58 |
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2,333 |
by Bob3k Mon, 2014-04-21 06:47 |
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starting sequence with flexible backbone design by kmaksim » Mon, 2009-03-23 07:10 |
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2,702 |
by vanita Mon, 2014-04-21 06:47 |
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some Q/A about SnugDock by jarod » Fri, 2010-04-30 20:02 |
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2,649 |
by jarod Mon, 2014-04-21 06:47 |
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some posts from old forum by admin » Tue, 2008-04-22 11:05 |
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2,454 |
by admin Mon, 2014-04-21 06:47 |
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Single or multiple decoys from relax? by kosa » Thu, 2008-05-15 06:11 |
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2,923 |
by kosa Mon, 2014-04-21 06:47 |
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Side chain sampling by mayo » Wed, 2009-04-15 10:14 |
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3,016 |
by kaufmann Mon, 2014-04-21 06:47 |
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sequence variability in rosetta design by sdh » Thu, 2009-10-15 03:44 |
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3,057 |
by smlewis Mon, 2014-04-21 06:47 |
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Scoring Weights by AndrewBworth » Tue, 2009-07-28 18:08 |
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3,325 |
by momeara Mon, 2014-04-21 06:47 |
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run_prof.py by joseph » Fri, 2010-11-05 14:38 |
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2,232 |
by joseph Mon, 2014-04-21 06:47 |
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RosettaDock: questions about Fab file and constraints by lucasimonelli » Thu, 2008-10-09 05:57 |
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3,576 |
by yiliu Mon, 2014-04-21 06:47 |
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RosettaDock with loop rebuild HOWTO ? by lcavallo » Thu, 2009-06-04 09:12 |
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5,664 |
by mchldln Mon, 2014-04-21 06:47 |
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RosettaDock and -flex_peptide by pshannon » Tue, 2008-09-16 17:56 |
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2,118 |
by yiliu Mon, 2014-04-21 06:47 |
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RosettaDesign parameters by gbeckham » Tue, 2008-07-01 18:03 |
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4,521 |
by yiliu Mon, 2014-04-21 06:47 |
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RosettaDesign (each run produces the same sequence with many GLY residues ) by shirleyzheng » Wed, 2009-05-13 10:25 |
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6,301 |
by shirleyzheng Mon, 2014-04-21 06:47 |
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RosettaAntibody, Fv without terminal 3 residues by yuich » Sun, 2010-09-26 21:07 |
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3,513 |
by aroop Mon, 2014-04-21 06:47 |
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rosetta3 compliation by sdh » Mon, 2009-05-04 03:16 |
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1,903 |
by sdh Mon, 2014-04-21 06:47 |
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Rosetta3 - docking_protocol - fold_tree and number of residues problem by dsept » Sat, 2009-09-05 11:32 |
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7,320 |
by sid Mon, 2014-04-21 06:47 |
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Rosetta-2.3.0 build on MAC OSX 10.5.8 by joseph » Wed, 2010-09-08 10:26 |
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4,942 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta-2.3.0 build on fedora 9 by akneoh » Mon, 2008-11-17 16:22 |
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3,028 |
by Temsiri Mon, 2014-04-21 06:47 |
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Rosetta stops while generating decoys by jjan » Wed, 2010-01-13 00:45 |
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2,227 |
by jjan Mon, 2014-04-21 06:47 |
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rosetta reproducibility by lcavallo » Thu, 2009-03-05 02:55 |
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3,929 |
by lcavallo Mon, 2014-04-21 06:47 |
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Rosetta Loop Modeling error by mdyini » Tue, 2009-03-31 15:22 |
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2,674 |
by vanita Mon, 2014-04-21 06:47 |
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Rosetta hangs while generating decoys by lcavallo » Sat, 2009-03-07 02:11 |
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2,199 |
by lcavallo Mon, 2014-04-21 06:47 |
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Rosetta for Windows by jp » Wed, 2008-04-23 23:38 |
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7,957 |
by yiliu Mon, 2014-04-21 06:47 |
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Rosetta doesn't read the starting structure - solved by Bob3k » Fri, 2009-02-06 02:00 |
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6,698 |
by Bob3k Mon, 2014-04-21 06:47 |
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rosetta antibody model, the option -snug_fit by jarod » Thu, 2010-04-01 18:30 |
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2,498 |
by jarod Mon, 2014-04-21 06:47 |
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Rosetta and Membrane Proteins by admin » Fri, 2008-04-18 15:26 |
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2,182 |
by admin Mon, 2014-04-21 06:47 |
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Rosetta Academic Workshop Series by xavier » Mon, 2009-01-26 11:50 |
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2,641 |
by xavier Mon, 2014-04-21 06:47 |
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Rosetta 2.1.1 troubleshooting by yiliu » Thu, 2008-01-10 08:51 |
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2,646 |
by yiliu Mon, 2014-04-21 06:47 |
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rg cutoff by yiliu » Thu, 2008-01-10 08:46 |
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2,248 |
by yiliu Mon, 2014-04-21 06:47 |
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resemble docking use rosettadock found rms=0 in output by lqzhang » Sun, 2009-07-19 06:01 |
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3,101 |
by lqzhang Mon, 2014-04-21 06:47 |
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Re-building protocol crash by murgantia » Sun, 2011-03-13 05:28 |
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2,193 |
by murgantia Mon, 2014-04-21 06:47 |
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Re orienting files from the PDB. by AndrewBworth » Thu, 2009-06-25 19:09 |
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2,968 |
by vanita Mon, 2014-04-21 06:47 |
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random seed by kosa » Thu, 2008-05-08 03:11 |
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8,800 |
by rmoretti Tue, 2017-06-20 08:47 |
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Questions about -fix_natsc and -trim by mdyini » Thu, 2009-06-11 13:27 |
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2,133 |
by mdyini Mon, 2014-04-21 06:47 |
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question about file: cluster_info_silent by admin » Fri, 2008-04-18 15:19 |
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4,251 |
by ndousis Mon, 2014-04-21 06:47 |
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question about antibody modeling and snugdock process option by iojeong » Sun, 2023-04-16 19:18 |
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501 |
by iojeong Sun, 2023-04-16 19:18 |
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program not terminating... by atoler » Wed, 2009-02-25 06:40 |
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3,440 |
by atoler Mon, 2014-04-21 06:47 |
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producing good idealized structures by lesi » Thu, 2009-06-18 15:06 |
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5,160 |
by sid Mon, 2014-04-21 06:47 |
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Problems in installing Rosetta3 in Red Hat Linux by jjz2009 » Fri, 2009-08-21 08:21 |
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3,097 |
by jjz2009 Mon, 2014-04-21 06:47 |
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problems building rosetta 2.3.0 with icc by lcavallo » Wed, 2009-03-04 05:32 |
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2,206 |
by lcavallo Mon, 2014-04-21 06:47 |
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Prepacking structures using RosettaDock on a Windows platform by suj88 » Fri, 2009-03-13 14:20 |
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3,968 |
by suj88 Mon, 2014-04-21 06:47 |
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pose_ligand_docking? and constraint file... by mdyini » Wed, 2009-07-01 20:13 |
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2,222 |
by mdyini Mon, 2014-04-21 06:47 |
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Pose Docking by AndrewBworth » Sat, 2009-08-08 12:50 |
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4,252 |
by matchf Mon, 2014-04-21 06:47 |
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pNNMAKE and loops zone file by yiliu » Thu, 2008-01-10 08:49 |
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2,159 |
by yiliu Mon, 2014-04-21 06:47 |
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Piecing together multiple domains by AndrewBworth » Mon, 2009-06-22 14:24 |
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3,090 |
by vanita Mon, 2014-04-21 06:47 |
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N-terminus and loops by sreiling » Thu, 2009-01-29 08:27 |
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4,356 |
by vanita Mon, 2014-04-21 06:47 |
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multiple_processor by yiliu » Thu, 2008-01-10 08:47 |
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2,198 |
by yiliu Mon, 2014-04-21 06:47 |
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multigraft design by spraha » Wed, 2012-01-11 07:57 |
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34,807 |
by Sergey Menis Mon, 2014-04-21 06:47 |
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MPI Rosetta by pager2 » Fri, 2008-08-01 08:13 |
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3,302 |
by yiliu Mon, 2014-04-21 06:47 |
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module reconstruct_PDB_by_index
module reconstruct_PDB_by_index by yiliu » Thu, 2008-01-10 08:30 |
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2,171 |
by yiliu Mon, 2014-04-21 06:47 |
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modelling loops and inserted domains by danzinho » Fri, 2009-01-16 02:14 |
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7,706 |
by wenchangyu2008 Mon, 2014-04-21 06:47 |
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Missing make options for 64-bit platforms in RosettaBundle-2.3.0.gz by dean » Fri, 2008-06-06 04:17 |
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2,809 |
by rmosca Mon, 2014-04-21 06:47 |
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MinGW build problem by tlmcraig » Thu, 2008-08-21 12:22 |
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3,281 |
by yiliu Mon, 2014-04-21 06:47 |
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membrane protein docking by angel » Thu, 2008-10-23 08:50 |
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3,385 |
by yiliu Mon, 2014-04-21 06:47 |
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Make_fragments.pl database by TiagoGomes » Wed, 2009-10-14 04:46 |
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3,111 |
by brspurri Mon, 2014-04-21 06:47 |
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make_fragments by ctaylor » Mon, 2009-09-21 12:42 |
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5,969 |
by smlewis Mon, 2014-04-21 06:47 |
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make_fragment by icb_bio » Tue, 2008-05-06 22:12 |
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8,201 |
by aork Mon, 2014-04-21 06:47 |
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make fragment by joseph » Sun, 2010-10-31 21:16 |
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2,299 |
by joseph Mon, 2014-04-21 06:47 |
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Loop modeling with multiple chains by sonyadave » Tue, 2008-05-06 13:44 |
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4,815 |
by sonyadave Mon, 2014-04-21 06:47 |
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loop modeling with KIC mode by wenchangyu2008 » Tue, 2010-03-02 06:05 |
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4,662 |
by wenchangyu2008 Mon, 2014-04-21 06:47 |
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Linux Distros and Settings by Brev » Tue, 2008-08-19 17:48 |
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3,840 |
by sdarnell Mon, 2014-04-21 06:47 |
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ligand dock residue selection by Silice » Mon, 2009-08-03 07:54 |
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2,972 |
by Silice Mon, 2014-04-21 06:47 |
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Is it possible to score interface in -score mode? **Solved** by maperalta » Thu, 2009-07-23 10:29 |
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3,681 |
by maperalta Mon, 2014-04-21 06:47 |
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Interpreting Clustering Results by PaulaBanks » Sat, 2013-06-08 23:41 |
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5,332 |
by rmoretti Mon, 2014-04-21 06:48 |
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Installation report and instructions: Ubuntu 8.10 64 bit by TamirEr » Mon, 2009-01-12 11:18 |
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7,257 |
by chinhsutran Mon, 2014-04-21 06:47 |
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Input files of RosettaDNA mode by r96631028 » Tue, 2009-04-28 04:39 |
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2,016 |
by r96631028 Mon, 2014-04-21 06:47 |
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Increase compactness of decoys by kosa » Sat, 2008-06-21 12:47 |
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4,711 |
by kosa Mon, 2014-04-21 06:47 |
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icc versus gcc and 64bit versus 32bit performances by lcavallo » Fri, 2009-02-20 15:29 |
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1,950 |
by lcavallo Mon, 2014-04-21 06:47 |
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How to set gcc optimization level with scons to compile 64bit rosetta-2.3.0 by hazards » Fri, 2009-05-15 14:16 |
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3,858 |
by hazards Mon, 2014-04-21 06:47 |
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how to score a pdb in rosetta 2.3 by Lindsay » Tue, 2012-07-17 08:42 |
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3,057 |
by smlewis Mon, 2014-04-21 06:47 |
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How to reconstruct full atom structure from silent file by kosa » Mon, 2008-06-23 07:25 |
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7,205 |
by yiliu Mon, 2014-04-21 06:47 |
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How to prepare the pdblist file for docking_ensmble in Rosetta3.4 This topic has been moved to "Rosetta 3 - General " (View topic) |
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How to model a protein that dimerizes to a small molecule? This topic has been moved to "Rosetta 3 - General " (View topic) |
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how to get around no sequence for de novo design? by neilcifer » Mon, 2008-10-06 15:01 |
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3,670 |
by huxz Mon, 2014-04-21 06:47 |
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How to dock structures locally? by rwn » Thu, 2008-05-15 07:26 |
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2,337 |
by yiliu Mon, 2014-04-21 06:47 |
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